Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L6-201ENST00000626483 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L1-201ENST00000627662 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L8-201ENST00000629013 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L3-201ENST00000630187 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L7-201ENST00000630678 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 DUX4L5-201ENST00000630834 1275 ntBASIC23.49■■□□□ 1.35
VARS2Q5ST30 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VARS2Q5ST30 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
VARS2Q5ST30 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VARS2Q5ST30 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VARS2Q5ST30 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VARS2Q5ST30 AC105233.4-201ENST00000642045 216 ntBASIC23.48■■□□□ 1.35
VARS2Q5ST30 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VARS2Q5ST30 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VARS2Q5ST30 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VARS2Q5ST30 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VARS2Q5ST30 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
VARS2Q5ST30 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.47■■□□□ 1.35
VARS2Q5ST30 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.47■■□□□ 1.35
VARS2Q5ST30 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.47■■□□□ 1.35
VARS2Q5ST30 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VARS2Q5ST30 RARRES2P11-201ENST00000635158 484 ntBASIC23.47■■□□□ 1.35
VARS2Q5ST30 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VARS2Q5ST30 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.47■■□□□ 1.35
VARS2Q5ST30 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
VARS2Q5ST30 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.46■■□□□ 1.35
VARS2Q5ST30 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.46■■□□□ 1.35
VARS2Q5ST30 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.46■■□□□ 1.35
VARS2Q5ST30 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.46■■□□□ 1.35
VARS2Q5ST30 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
VARS2Q5ST30 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.46■■□□□ 1.35
VARS2Q5ST30 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
VARS2Q5ST30 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.45■■□□□ 1.34
VARS2Q5ST30 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 KRT18P5-201ENST00000436075 1291 ntBASIC23.45■■□□□ 1.34
VARS2Q5ST30 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.45■■□□□ 1.34
VARS2Q5ST30 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VARS2Q5ST30 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
VARS2Q5ST30 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VARS2Q5ST30 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VARS2Q5ST30 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.44■■□□□ 1.34
VARS2Q5ST30 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VARS2Q5ST30 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 CCDC92B-201ENST00000575506 885 ntBASIC23.44■■□□□ 1.34
VARS2Q5ST30 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VARS2Q5ST30 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VARS2Q5ST30 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.44■■□□□ 1.34
VARS2Q5ST30 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VARS2Q5ST30 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VARS2Q5ST30 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VARS2Q5ST30 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
VARS2Q5ST30 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
VARS2Q5ST30 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.43■■□□□ 1.34
VARS2Q5ST30 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VARS2Q5ST30 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.42■■□□□ 1.34
VARS2Q5ST30 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
VARS2Q5ST30 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.42■■□□□ 1.34
VARS2Q5ST30 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VARS2Q5ST30 AC068587.7-201ENST00000641602 218 ntBASIC23.42■■□□□ 1.34
VARS2Q5ST30 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.42■■□□□ 1.34
VARS2Q5ST30 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VARS2Q5ST30 LINC02228-203ENST00000641970 1355 ntBASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms