Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCSMST1Q4G0I0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 AL138724.1-201ENST00000606771 1088 ntBASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 AC011298.3-201ENST00000615796 283 ntBASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCSMST1Q4G0I0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 PBX2P1-201ENST00000493219 1291 ntBASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 AC010525.1-201ENST00000585559 441 ntBASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 AC136469.2-201ENST00000623944 1028 ntBASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCSMST1Q4G0I0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 MIR4767-201ENST00000582827 78 ntBASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 AC135279.3-201ENST00000610945 1311 ntBASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCSMST1Q4G0I0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCSMST1Q4G0I0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCSMST1Q4G0I0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 AC106739.1-201ENST00000617035 715 ntBASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCSMST1Q4G0I0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCSMST1Q4G0I0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms