Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RSPO4Q2I0M5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 GCSHP5-201ENST00000443090 522 ntBASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RSPO4Q2I0M5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RSPO4Q2I0M5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 AC105036.2-201ENST00000569468 176 ntBASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RSPO4Q2I0M5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.58■■□□□ 1.05
RSPO4Q2I0M5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RSPO4Q2I0M5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 AL158047.1-201ENST00000445918 881 ntBASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 SLC7A5P1-201ENST00000568957 537 ntBASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RSPO4Q2I0M5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 AC079140.4-201ENST00000507448 529 ntBASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.56■■□□□ 1.04
RSPO4Q2I0M5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RSPO4Q2I0M5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 ERN1-208ENST00000606895 2068 ntBASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RSPO4Q2I0M5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms