Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.85■□□□□ 0.61
EFNB3Q15768 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
EFNB3Q15768 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EFNB3Q15768 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
EFNB3Q15768 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.84■□□□□ 0.61
EFNB3Q15768 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
EFNB3Q15768 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNB3Q15768 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNB3Q15768 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.84■□□□□ 0.61
EFNB3Q15768 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNB3Q15768 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
EFNB3Q15768 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.84■□□□□ 0.61
EFNB3Q15768 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
EFNB3Q15768 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.84■□□□□ 0.61
EFNB3Q15768 AC068587.7-201ENST00000641602 218 ntBASIC18.84■□□□□ 0.61
EFNB3Q15768 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNB3Q15768 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.84■□□□□ 0.61
EFNB3Q15768 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNB3Q15768 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EFNB3Q15768 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.83■□□□□ 0.61
EFNB3Q15768 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EFNB3Q15768 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
EFNB3Q15768 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
EFNB3Q15768 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.83■□□□□ 0.6
EFNB3Q15768 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
EFNB3Q15768 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB3Q15768 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.83■□□□□ 0.6
EFNB3Q15768 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB3Q15768 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB3Q15768 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.83■□□□□ 0.6
EFNB3Q15768 AL354811.1-201ENST00000610286 706 ntBASIC18.83■□□□□ 0.6
EFNB3Q15768 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.83■□□□□ 0.6
EFNB3Q15768 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB3Q15768 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.83■□□□□ 0.6
EFNB3Q15768 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EFNB3Q15768 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
EFNB3Q15768 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB3Q15768 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EFNB3Q15768 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
EFNB3Q15768 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
EFNB3Q15768 AC004687.1-201ENST00000579003 1625 ntBASIC18.82■□□□□ 0.6
EFNB3Q15768 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB3Q15768 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.82■□□□□ 0.6
EFNB3Q15768 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB3Q15768 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB3Q15768 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.82■□□□□ 0.6
EFNB3Q15768 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EFNB3Q15768 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.82■□□□□ 0.6
EFNB3Q15768 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.82■□□□□ 0.6
EFNB3Q15768 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB3Q15768 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EFNB3Q15768 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB3Q15768 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB3Q15768 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB3Q15768 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.81■□□□□ 0.6
EFNB3Q15768 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNB3Q15768 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.81■□□□□ 0.6
EFNB3Q15768 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB3Q15768 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EFNB3Q15768 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EFNB3Q15768 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.81■□□□□ 0.6
EFNB3Q15768 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 AC092068.2-201ENST00000590491 1708 ntBASIC18.8■□□□□ 0.6
EFNB3Q15768 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB3Q15768 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 AC027612.3-201ENST00000413684 1047 ntBASIC18.8■□□□□ 0.6
EFNB3Q15768 YBX1P1-201ENST00000445822 960 ntBASIC18.8■□□□□ 0.6
EFNB3Q15768 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 AC012414.1-201ENST00000556676 535 ntBASIC18.8■□□□□ 0.6
EFNB3Q15768 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
EFNB3Q15768 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.8■□□□□ 0.6
EFNB3Q15768 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.8■□□□□ 0.6
EFNB3Q15768 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EFNB3Q15768 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.79■□□□□ 0.6
EFNB3Q15768 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
EFNB3Q15768 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.79■□□□□ 0.6
EFNB3Q15768 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.79■□□□□ 0.6
EFNB3Q15768 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.79■□□□□ 0.6
EFNB3Q15768 AC087623.3-201ENST00000607047 1098 ntBASIC18.79■□□□□ 0.6
EFNB3Q15768 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.79■□□□□ 0.6
EFNB3Q15768 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.79■□□□□ 0.6
EFNB3Q15768 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EFNB3Q15768 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EFNB3Q15768 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms