Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ZNF23-206ENST00000539742 2358 ntTSL 211.06□□□□□ -0.642e-6■■■■□ 19.8
SRSF1Q07955 KANSL3-203ENST00000418735 594 ntTSL 410.93□□□□□ -0.661e-8■■■■□ 19.8
SRSF1Q07955 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.682e-6■■■■□ 19.8
SRSF1Q07955 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.691e-15■■■■□ 19.8
SRSF1Q07955 UBXN11-203ENST00000374215 938 ntTSL 510.74□□□□□ -0.692e-6■■■■□ 19.8
SRSF1Q07955 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.72e-6■■■■□ 19.8
SRSF1Q07955 TKFC-203ENST00000524953 575 ntTSL 210.52□□□□□ -0.732e-6■■■■□ 19.8
SRSF1Q07955 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.731e-15■■■■□ 19.8
SRSF1Q07955 KANSL3-209ENST00000448075 701 ntTSL 510.48□□□□□ -0.731e-8■■■■□ 19.8
SRSF1Q07955 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC10.39□□□□□ -0.752e-6■■■■□ 19.8
SRSF1Q07955 TKFC-220ENST00000534134 585 ntTSL 310.25□□□□□ -0.772e-6■■■■□ 19.8
SRSF1Q07955 SNHG20-201ENST00000366365 1028 ntTSL 210.01□□□□□ -0.812e-6■■■■□ 19.8
SRSF1Q07955 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.842e-6■■■■□ 19.8
SRSF1Q07955 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC9.41□□□□□ -0.92e-6■■■■□ 19.8
SRSF1Q07955 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.92e-6■■■■□ 19.8
SRSF1Q07955 HKR1-214ENST00000589801 480 ntTSL 39.38□□□□□ -0.912e-6■■■■□ 19.8
SRSF1Q07955 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.041e-15■■■■□ 19.8
SRSF1Q07955 ZCCHC6-205ENST00000375960 4939 ntTSL 1 (best) BASIC8.43□□□□□ -1.062e-6■■■■□ 19.8
SRSF1Q07955 AC010547.5-201ENST00000561908 3677 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.072e-6■■■■□ 19.8
SRSF1Q07955 KANSL3-208ENST00000447759 5012 ntTSL 58.3□□□□□ -1.081e-8■■■■□ 19.8
SRSF1Q07955 KANSL3-213ENST00000475820 583 ntTSL 38.21□□□□□ -1.11e-8■■■■□ 19.8
SRSF1Q07955 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.111e-8■■■■□ 19.8
SRSF1Q07955 KANSL3-220ENST00000597150 2811 ntTSL 28.1□□□□□ -1.111e-8■■■■□ 19.8
SRSF1Q07955 KANSL3-218ENST00000487070 4937 ntTSL 1 (best)7.98□□□□□ -1.131e-8■■■■□ 19.8
SRSF1Q07955 ZNF23-205ENST00000497160 2799 ntTSL 5 BASIC7.95□□□□□ -1.142e-6■■■■□ 19.8
SRSF1Q07955 KANSL3-201ENST00000354204 5253 ntTSL 1 (best)7.94□□□□□ -1.141e-8■■■■□ 19.8
SRSF1Q07955 KANSL3-204ENST00000420155 5028 ntTSL 1 (best)7.84□□□□□ -1.151e-8■■■■□ 19.8
SRSF1Q07955 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC7.67□□□□□ -1.182e-6■■■■□ 19.8
SRSF1Q07955 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC7.45□□□□□ -1.222e-6■■■■□ 19.8
SRSF1Q07955 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC7.15□□□□□ -1.262e-6■■■■□ 19.8
SRSF1Q07955 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.282e-6■■■■□ 19.8
SRSF1Q07955 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.292e-6■■■■□ 19.8
SRSF1Q07955 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.3□□□□□ -1.42e-6■■■■□ 19.8
SRSF1Q07955 DNAJB11-204ENST00000495390 4079 ntTSL 25.67□□□□□ -1.52e-6■■■■□ 19.8
SRSF1Q07955 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.552e-6■■■■□ 19.8
SRSF1Q07955 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.572e-6■■■■□ 19.8
SRSF1Q07955 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.92□□□□□ -1.622e-6■■■■□ 19.8
SRSF1Q07955 SREK1-212ENST00000522912 2047 ntTSL 1 (best)13.51□□□□□ -0.256e-7■■■■□ 19.8
SRSF1Q07955 SREK1-209ENST00000520953 2172 ntTSL 512.91□□□□□ -0.346e-7■■■■□ 19.8
SRSF1Q07955 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.946e-7■■■■□ 19.8
SRSF1Q07955 PUM1-213ENST00000524516 561 ntTSL 29.35□□□□□ -0.917e-11■■■■□ 19.8
SRSF1Q07955 PUM1-209ENST00000480602 906 ntTSL 58.68□□□□□ -1.027e-11■■■■□ 19.8
SRSF1Q07955 MALAT1-202ENST00000534336 8708 ntBASIC8.02□□□□□ -1.133e-49■■■■□ 19.7
SRSF1Q07955 MSH5-SAPCD1-206ENST00000491552 706 ntTSL 314.88□□□□□ -0.039e-9■■■■□ 19.7
SRSF1Q07955 MSH5-208ENST00000429846 616 ntTSL 314.54□□□□□ -0.089e-9■■■■□ 19.7
SRSF1Q07955 GPCPD1-206ENST00000481690 819 ntTSL 321.23■□□□□ 0.993e-7■■■■□ 19.7
SRSF1Q07955 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.433e-7■■■■□ 19.7
SRSF1Q07955 WDR45-222ENST00000476728 569 ntTSL 419.15■□□□□ 0.663e-6■■■■□ 19.7
SRSF1Q07955 WDR45-233ENST00000634736 757 ntTSL 519.15■□□□□ 0.663e-6■■■■□ 19.7
SRSF1Q07955 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.65■□□□□ 0.583e-6■■■■□ 19.7
SRSF1Q07955 WDR45-243ENST00000635666 947 ntTSL 518.56■□□□□ 0.563e-6■■■■□ 19.7
SRSF1Q07955 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.53e-6■■■■□ 19.7
SRSF1Q07955 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.95■□□□□ 0.463e-6■■■■□ 19.7
SRSF1Q07955 WDR45-226ENST00000496803 986 ntTSL 217.26■□□□□ 0.353e-6■■■■□ 19.7
SRSF1Q07955 WDR45-232ENST00000634711 1159 ntTSL 217.26■□□□□ 0.353e-6■■■■□ 19.7
SRSF1Q07955 WDR45-242ENST00000635344 737 ntTSL 516.78■□□□□ 0.283e-6■■■■□ 19.7
SRSF1Q07955 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.273e-6■■■■□ 19.7
SRSF1Q07955 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.53■□□□□ 0.243e-6■■■■□ 19.7
SRSF1Q07955 WDR45-231ENST00000634671 822 ntTSL 316.47■□□□□ 0.233e-6■■■■□ 19.7
SRSF1Q07955 WDR45-235ENST00000634849 918 ntTSL 316.38■□□□□ 0.213e-6■■■■□ 19.7
SRSF1Q07955 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.73■□□□□ 0.113e-6■■■■□ 19.7
SRSF1Q07955 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.57■□□□□ 0.083e-6■■■■□ 19.7
SRSF1Q07955 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.51■□□□□ 0.073e-6■■■■□ 19.7
SRSF1Q07955 WDR45-214ENST00000465431 1069 ntTSL 315.18■□□□□ 0.023e-6■■■■□ 19.7
SRSF1Q07955 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.11■□□□□ 0.013e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-207ENST00000547698 905 ntTSL 515.08■□□□□ 03e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-209ENST00000620616 2099 ntTSL 515.08■□□□□ 03e-6■■■■□ 19.7
SRSF1Q07955 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.36□□□□□ -0.113e-6■■■■□ 19.7
SRSF1Q07955 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.25□□□□□ -0.133e-6■■■■□ 19.7
SRSF1Q07955 WDR45-220ENST00000475880 872 ntTSL 514□□□□□ -0.173e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-220ENST00000551272 472 ntTSL 213.98□□□□□ -0.173e-6■■■■□ 19.7
SRSF1Q07955 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.23e-6■■■■□ 19.7
SRSF1Q07955 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.73□□□□□ -0.213e-6■■■■□ 19.7
SRSF1Q07955 WDR45-227ENST00000634390 492 ntTSL 413.73□□□□□ -0.213e-6■■■■□ 19.7
SRSF1Q07955 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.59□□□□□ -0.233e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-208ENST00000547813 1024 ntTSL 513.51□□□□□ -0.253e-6■■■■□ 19.7
SRSF1Q07955 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.47□□□□□ -0.253e-6■■■■□ 19.7
SRSF1Q07955 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.33e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.09□□□□□ -0.313e-6■■■■□ 19.7
SRSF1Q07955 WDR45-213ENST00000465382 811 ntTSL 513.05□□□□□ -0.323e-6■■■■□ 19.7
SRSF1Q07955 WDR45-209ENST00000419567 643 ntTSL 513.05□□□□□ -0.323e-6■■■■□ 19.7
SRSF1Q07955 WDR45-229ENST00000634522 545 ntTSL 512.59□□□□□ -0.393e-6■■■■□ 19.7
SRSF1Q07955 WDR45-219ENST00000474053 728 ntTSL 512.56□□□□□ -0.43e-6■■■■□ 19.7
SRSF1Q07955 CARS-213ENST00000527330 564 ntTSL 412.46□□□□□ -0.413e-6■■■■□ 19.7
SRSF1Q07955 CARS-211ENST00000524825 550 ntTSL 412.46□□□□□ -0.413e-6■■■■□ 19.7
SRSF1Q07955 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.421e-16■■■■□ 19.7
SRSF1Q07955 WDR45-204ENST00000376357 567 ntTSL 212.3□□□□□ -0.443e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-202ENST00000417750 2334 ntTSL 212.22□□□□□ -0.453e-6■■■■□ 19.7
SRSF1Q07955 WDR45-210ENST00000423215 816 ntTSL 511.45□□□□□ -0.583e-6■■■■□ 19.7
SRSF1Q07955 WDR45-216ENST00000471338 699 ntTSL 511.42□□□□□ -0.583e-6■■■■□ 19.7
SRSF1Q07955 NUB1-207ENST00000480714 586 ntTSL 211.33□□□□□ -0.63e-6■■■■□ 19.7
SRSF1Q07955 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.623e-6■■■■□ 19.7
SRSF1Q07955 GOLGA2-205ENST00000462089 766 ntTSL 311.18□□□□□ -0.623e-6■■■■□ 19.7
SRSF1Q07955 NUB1-202ENST00000460712 664 ntTSL 210.96□□□□□ -0.653e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-216ENST00000550867 2800 ntTSL 1 (best)10.93□□□□□ -0.663e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.73e-6■■■■□ 19.7
SRSF1Q07955 WDR45-215ENST00000465806 2610 ntTSL 210.54□□□□□ -0.723e-6■■■■□ 19.7
SRSF1Q07955 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.733e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-210ENST00000621075 2838 ntTSL 210.32□□□□□ -0.763e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.763e-6■■■■□ 19.7
Retrieved 100 of 14,836 protein–RNA pairs in 174 ms