Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CXCR4P61073 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CXCR4P61073 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CXCR4P61073 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.1■□□□□ 0.81
CXCR4P61073 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CXCR4P61073 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.1■□□□□ 0.81
CXCR4P61073 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CXCR4P61073 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CXCR4P61073 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CXCR4P61073 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.09■□□□□ 0.81
CXCR4P61073 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CXCR4P61073 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CXCR4P61073 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CXCR4P61073 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
CXCR4P61073 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CXCR4P61073 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CXCR4P61073 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CXCR4P61073 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.08■□□□□ 0.81
CXCR4P61073 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CXCR4P61073 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CXCR4P61073 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.08■□□□□ 0.81
CXCR4P61073 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.08■□□□□ 0.81
CXCR4P61073 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CXCR4P61073 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.08■□□□□ 0.81
CXCR4P61073 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CXCR4P61073 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.08■□□□□ 0.8
CXCR4P61073 AC005229.4-201ENST00000610085 2198 ntBASIC20.08■□□□□ 0.8
CXCR4P61073 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CXCR4P61073 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CXCR4P61073 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.07■□□□□ 0.8
CXCR4P61073 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CXCR4P61073 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.07■□□□□ 0.8
CXCR4P61073 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CXCR4P61073 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.06■□□□□ 0.8
CXCR4P61073 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCR4P61073 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.06■□□□□ 0.8
CXCR4P61073 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.06■□□□□ 0.8
CXCR4P61073 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.06■□□□□ 0.8
CXCR4P61073 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CXCR4P61073 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CXCR4P61073 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
CXCR4P61073 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CXCR4P61073 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 KRT18P60-201ENST00000312876 1297 ntBASIC20.05■□□□□ 0.8
CXCR4P61073 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.05■□□□□ 0.8
CXCR4P61073 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCR4P61073 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CXCR4P61073 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
CXCR4P61073 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.04■□□□□ 0.8
CXCR4P61073 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 AC244015.2-201ENST00000616358 1861 ntBASIC20.04■□□□□ 0.8
CXCR4P61073 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.04■□□□□ 0.8
CXCR4P61073 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
CXCR4P61073 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCR4P61073 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CXCR4P61073 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CXCR4P61073 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCR4P61073 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.03■□□□□ 0.8
CXCR4P61073 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCR4P61073 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CXCR4P61073 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CXCR4P61073 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCR4P61073 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCR4P61073 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCR4P61073 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms