Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3S2P59780 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S2P59780 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S2P59780 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S2P59780 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
AP3S2P59780 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
AP3S2P59780 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
AP3S2P59780 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S2P59780 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.93■□□□□ 0.62
AP3S2P59780 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S2P59780 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.93■□□□□ 0.62
AP3S2P59780 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
AP3S2P59780 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP3S2P59780 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
AP3S2P59780 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
AP3S2P59780 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
AP3S2P59780 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AP3S2P59780 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
AP3S2P59780 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.92■□□□□ 0.62
AP3S2P59780 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.92■□□□□ 0.62
AP3S2P59780 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.92■□□□□ 0.62
AP3S2P59780 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP3S2P59780 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
AP3S2P59780 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
AP3S2P59780 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
AP3S2P59780 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.91■□□□□ 0.62
AP3S2P59780 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
AP3S2P59780 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
AP3S2P59780 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 AC092296.2-201ENST00000589470 999 ntBASIC18.91■□□□□ 0.62
AP3S2P59780 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
AP3S2P59780 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.91■□□□□ 0.62
AP3S2P59780 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP3S2P59780 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3S2P59780 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.9■□□□□ 0.62
AP3S2P59780 ECEL1P2-201ENST00000461596 1295 ntBASIC18.9■□□□□ 0.62
AP3S2P59780 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.9■□□□□ 0.62
AP3S2P59780 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AP3S2P59780 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
AP3S2P59780 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
AP3S2P59780 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3S2P59780 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3S2P59780 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3S2P59780 CR559946.2-201ENST00000623684 991 ntBASIC18.89■□□□□ 0.61
AP3S2P59780 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
AP3S2P59780 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3S2P59780 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AP3S2P59780 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AP3S2P59780 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
AP3S2P59780 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 AC010542.4-201ENST00000563151 1910 ntBASIC18.88■□□□□ 0.61
AP3S2P59780 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
AP3S2P59780 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
AP3S2P59780 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
AP3S2P59780 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.88■□□□□ 0.61
AP3S2P59780 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
AP3S2P59780 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 AL592295.1-201ENST00000400984 884 ntBASIC18.87■□□□□ 0.61
AP3S2P59780 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
AP3S2P59780 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.87■□□□□ 0.61
AP3S2P59780 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
AP3S2P59780 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
AP3S2P59780 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms