Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CLDN12P56749 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.14■□□□□ 0.66
CLDN12P56749 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.14■□□□□ 0.66
CLDN12P56749 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN12P56749 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN12P56749 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
CLDN12P56749 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN12P56749 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN12P56749 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN12P56749 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN12P56749 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN12P56749 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN12P56749 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLDN12P56749 AF131216.4-201ENST00000638924 1588 ntBASIC19.13■□□□□ 0.65
CLDN12P56749 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN12P56749 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLDN12P56749 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN12P56749 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN12P56749 U85056.1-201ENST00000616429 682 ntBASIC19.12■□□□□ 0.65
CLDN12P56749 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN12P56749 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN12P56749 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN12P56749 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
CLDN12P56749 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN12P56749 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CLDN12P56749 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN12P56749 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN12P56749 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN12P56749 AC120024.1-201ENST00000562672 995 ntBASIC19.11■□□□□ 0.65
CLDN12P56749 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLDN12P56749 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN12P56749 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CLDN12P56749 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN12P56749 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN12P56749 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLDN12P56749 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CLDN12P56749 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN12P56749 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN12P56749 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN12P56749 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN12P56749 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN12P56749 SLC25A24-204ENST00000569674 2357 ntBASIC19.1■□□□□ 0.65
CLDN12P56749 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN12P56749 AC022616.5-201ENST00000518796 181 ntBASIC19.1■□□□□ 0.65
CLDN12P56749 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.1■□□□□ 0.65
CLDN12P56749 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN12P56749 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN12P56749 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN12P56749 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN12P56749 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN12P56749 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLDN12P56749 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN12P56749 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN12P56749 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN12P56749 AC004448.1-201ENST00000458332 883 ntBASIC19.09■□□□□ 0.65
CLDN12P56749 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.09■□□□□ 0.65
CLDN12P56749 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN12P56749 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN12P56749 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN12P56749 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN12P56749 AC010542.4-201ENST00000563151 1910 ntBASIC19.08■□□□□ 0.65
CLDN12P56749 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN12P56749 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN12P56749 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN12P56749 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN12P56749 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN12P56749 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.08■□□□□ 0.64
CLDN12P56749 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLDN12P56749 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN12P56749 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN12P56749 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
CLDN12P56749 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms