Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DUX4L15-201ENST00000611059 1267 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L23-201ENST00000615195 1269 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L24-201ENST00000617576 1269 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L22-201ENST00000618238 1269 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L20-201ENST00000619712 1269 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L21-201ENST00000622058 1269 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L10-201ENST00000622460 1267 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 DUX4L25-201ENST00000624915 1269 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5CP51148 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB5CP51148 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5CP51148 AC005229.4-201ENST00000610085 2198 ntBASIC17.73■□□□□ 0.43
RAB5CP51148 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5CP51148 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5CP51148 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB5CP51148 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAB5CP51148 AP006261.1-201ENST00000584783 668 ntBASIC17.72■□□□□ 0.43
RAB5CP51148 AC044849.2-201ENST00000606596 710 ntBASIC17.72■□□□□ 0.43
RAB5CP51148 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 AC087741.3-201ENST00000624270 1347 ntBASIC17.72■□□□□ 0.43
RAB5CP51148 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB5CP51148 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB5CP51148 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB5CP51148 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB5CP51148 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB5CP51148 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.71■□□□□ 0.42
RAB5CP51148 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAB5CP51148 AC010542.4-201ENST00000563151 1910 ntBASIC17.7■□□□□ 0.42
RAB5CP51148 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 HLA-V-202ENST00000446817 847 ntBASIC17.7■□□□□ 0.42
RAB5CP51148 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB5CP51148 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
RAB5CP51148 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5CP51148 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB5CP51148 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RAB5CP51148 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB5CP51148 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.69■□□□□ 0.42
RAB5CP51148 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5CP51148 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5CP51148 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB5CP51148 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
RAB5CP51148 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB5CP51148 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB5CP51148 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB5CP51148 AC025884.2-201ENST00000553429 711 ntBASIC17.68■□□□□ 0.42
RAB5CP51148 LINC01971-201ENST00000617888 1048 ntBASIC17.68■□□□□ 0.42
RAB5CP51148 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB5CP51148 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB5CP51148 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB5CP51148 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB5CP51148 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB5CP51148 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB5CP51148 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAB5CP51148 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB5CP51148 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms