Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2AP49459 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UBE2AP49459 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC13.92□□□□□ -0.18
UBE2AP49459 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC13.92□□□□□ -0.18
UBE2AP49459 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC13.92□□□□□ -0.18
UBE2AP49459 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 SNX5-217ENST00000606557 1087 ntBASIC13.92□□□□□ -0.18
UBE2AP49459 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UBE2AP49459 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UBE2AP49459 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
UBE2AP49459 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC13.92□□□□□ -0.18
UBE2AP49459 AC079834.2-201ENST00000609776 1949 ntBASIC13.92□□□□□ -0.18
UBE2AP49459 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
UBE2AP49459 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
UBE2AP49459 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
UBE2AP49459 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
UBE2AP49459 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
UBE2AP49459 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
UBE2AP49459 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2AP49459 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 AC005703.6-201ENST00000623265 1329 ntBASIC13.9□□□□□ -0.18
UBE2AP49459 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2AP49459 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2AP49459 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 USF2-207ENST00000595068 1612 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2AP49459 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2AP49459 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2AP49459 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2AP49459 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.9□□□□□ -0.18
UBE2AP49459 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.9□□□□□ -0.18
UBE2AP49459 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC13.9□□□□□ -0.18
UBE2AP49459 MTDHP2-201ENST00000601468 714 ntBASIC13.9□□□□□ -0.18
UBE2AP49459 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
UBE2AP49459 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UBE2AP49459 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
UBE2AP49459 C9orf163-202ENST00000624034 2573 ntBASIC13.89□□□□□ -0.19
UBE2AP49459 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UBE2AP49459 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2AP49459 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2AP49459 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC13.89□□□□□ -0.19
UBE2AP49459 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
UBE2AP49459 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
UBE2AP49459 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2AP49459 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UBE2AP49459 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2AP49459 RARRES2P1-201ENST00000474487 481 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms