Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.02■■□□□ 1.6
CLCN1P35523 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 AL157384.1-201ENST00000445995 2473 ntBASIC25.02■■□□□ 1.6
CLCN1P35523 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLCN1P35523 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CLCN1P35523 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC25.01■■□□□ 1.59
CLCN1P35523 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLCN1P35523 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.01■■□□□ 1.59
CLCN1P35523 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLCN1P35523 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.01■■□□□ 1.59
CLCN1P35523 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25■■□□□ 1.59
CLCN1P35523 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25■■□□□ 1.59
CLCN1P35523 ATP5G2P3-201ENST00000429083 425 ntBASIC25■■□□□ 1.59
CLCN1P35523 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25■■□□□ 1.59
CLCN1P35523 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLCN1P35523 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLCN1P35523 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLCN1P35523 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.99■■□□□ 1.59
CLCN1P35523 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.99■■□□□ 1.59
CLCN1P35523 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CLCN1P35523 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.99■■□□□ 1.59
CLCN1P35523 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CLCN1P35523 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CLCN1P35523 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.98■■□□□ 1.59
CLCN1P35523 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.98■■□□□ 1.59
CLCN1P35523 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCN1P35523 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCN1P35523 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCN1P35523 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCN1P35523 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLCN1P35523 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.98■■□□□ 1.59
CLCN1P35523 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CLCN1P35523 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CLCN1P35523 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.98■■□□□ 1.59
CLCN1P35523 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
CLCN1P35523 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLCN1P35523 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.97■■□□□ 1.59
CLCN1P35523 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLCN1P35523 AL592295.1-201ENST00000400984 884 ntBASIC24.97■■□□□ 1.59
CLCN1P35523 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.97■■□□□ 1.59
CLCN1P35523 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CLCN1P35523 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
CLCN1P35523 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLCN1P35523 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.97■■□□□ 1.59
CLCN1P35523 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.97■■□□□ 1.59
CLCN1P35523 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.97■■□□□ 1.59
CLCN1P35523 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.96■■□□□ 1.59
CLCN1P35523 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.96■■□□□ 1.59
CLCN1P35523 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.96■■□□□ 1.59
CLCN1P35523 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CLCN1P35523 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CLCN1P35523 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.96■■□□□ 1.59
CLCN1P35523 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
CLCN1P35523 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
CLCN1P35523 PKD1P6-201ENST00000343738 4769 ntBASIC24.95■■□□□ 1.59
CLCN1P35523 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
CLCN1P35523 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCN1P35523 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CLCN1P35523 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.95■■□□□ 1.58
CLCN1P35523 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCN1P35523 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCN1P35523 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCN1P35523 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CLCN1P35523 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.94■■□□□ 1.58
CLCN1P35523 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CLCN1P35523 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CLCN1P35523 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLCN1P35523 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.94■■□□□ 1.58
CLCN1P35523 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.94■■□□□ 1.58
CLCN1P35523 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CLCN1P35523 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CLCN1P35523 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.93■■□□□ 1.58
CLCN1P35523 AC019171.1-201ENST00000601251 1056 ntBASIC24.93■■□□□ 1.58
CLCN1P35523 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CLCN1P35523 AC090877.2-201ENST00000558441 1738 ntBASIC24.92■■□□□ 1.58
CLCN1P35523 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLCN1P35523 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLCN1P35523 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CLCN1P35523 TSPY13P-201ENST00000338964 914 ntBASIC24.92■■□□□ 1.58
CLCN1P35523 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CLCN1P35523 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms