Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 RNF165-205ENST00000588679 2904 ntBASIC19■□□□□ 0.63
SLC6A1P30531 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC6A1P30531 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC6A1P30531 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
SLC6A1P30531 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC6A1P30531 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC6A1P30531 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
SLC6A1P30531 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A1P30531 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A1P30531 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A1P30531 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC6A1P30531 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A1P30531 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A1P30531 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A1P30531 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A1P30531 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A1P30531 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A1P30531 AC074183.2-201ENST00000623112 922 ntBASIC18.98■□□□□ 0.63
SLC6A1P30531 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A1P30531 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC6A1P30531 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC6A1P30531 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SLC6A1P30531 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SLC6A1P30531 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A1P30531 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A1P30531 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC6A1P30531 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.97■□□□□ 0.63
SLC6A1P30531 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A1P30531 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SLC6A1P30531 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
SLC6A1P30531 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC6A1P30531 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A1P30531 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A1P30531 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC6A1P30531 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC6A1P30531 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC6A1P30531 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A1P30531 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A1P30531 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A1P30531 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A1P30531 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
SLC6A1P30531 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 LINC01521-201ENST00000504184 1943 ntBASIC18.95■□□□□ 0.62
SLC6A1P30531 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC6A1P30531 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC6A1P30531 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A1P30531 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SLC6A1P30531 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A1P30531 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A1P30531 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A1P30531 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A1P30531 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SLC6A1P30531 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A1P30531 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SLC6A1P30531 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A1P30531 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A1P30531 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A1P30531 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A1P30531 AL157384.1-201ENST00000445995 2473 ntBASIC18.93■□□□□ 0.62
SLC6A1P30531 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A1P30531 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A1P30531 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC6A1P30531 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A1P30531 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A1P30531 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A1P30531 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A1P30531 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC6A1P30531 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A1P30531 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A1P30531 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A1P30531 AC087742.1-201ENST00000575880 1738 ntBASIC18.92■□□□□ 0.62
SLC6A1P30531 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms