Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.83■□□□□ 0.77
APEX1P27695 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.83■□□□□ 0.76
APEX1P27695 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
APEX1P27695 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APEX1P27695 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.83■□□□□ 0.76
APEX1P27695 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.83■□□□□ 0.76
APEX1P27695 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
APEX1P27695 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APEX1P27695 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APEX1P27695 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
APEX1P27695 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APEX1P27695 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.82■□□□□ 0.76
APEX1P27695 AC010997.5-201ENST00000609182 354 ntBASIC19.82■□□□□ 0.76
APEX1P27695 MIR6722-201ENST00000617286 78 ntBASIC19.82■□□□□ 0.76
APEX1P27695 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APEX1P27695 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.82■□□□□ 0.76
APEX1P27695 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APEX1P27695 PKD1P6-201ENST00000343738 4769 ntBASIC19.82■□□□□ 0.76
APEX1P27695 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.81■□□□□ 0.76
APEX1P27695 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
APEX1P27695 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
APEX1P27695 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.81■□□□□ 0.76
APEX1P27695 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APEX1P27695 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APEX1P27695 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.81■□□□□ 0.76
APEX1P27695 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APEX1P27695 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 KRT16P3-201ENST00000439127 1283 ntBASIC19.8■□□□□ 0.76
APEX1P27695 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.8■□□□□ 0.76
APEX1P27695 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.8■□□□□ 0.76
APEX1P27695 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
APEX1P27695 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.8■□□□□ 0.76
APEX1P27695 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APEX1P27695 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.79■□□□□ 0.76
APEX1P27695 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
APEX1P27695 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
APEX1P27695 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APEX1P27695 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
APEX1P27695 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.79■□□□□ 0.76
APEX1P27695 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.79■□□□□ 0.76
APEX1P27695 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.79■□□□□ 0.76
APEX1P27695 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APEX1P27695 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APEX1P27695 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APEX1P27695 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.78■□□□□ 0.76
APEX1P27695 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.78■□□□□ 0.76
APEX1P27695 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
APEX1P27695 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APEX1P27695 AC008406.3-201ENST00000620001 1374 ntBASIC19.78■□□□□ 0.76
APEX1P27695 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.78■□□□□ 0.76
APEX1P27695 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
APEX1P27695 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APEX1P27695 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APEX1P27695 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
APEX1P27695 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APEX1P27695 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.77■□□□□ 0.76
APEX1P27695 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.77■□□□□ 0.76
APEX1P27695 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.77■□□□□ 0.76
APEX1P27695 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.77■□□□□ 0.76
APEX1P27695 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APEX1P27695 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.77■□□□□ 0.75
APEX1P27695 AC005703.6-201ENST00000623265 1329 ntBASIC19.76■□□□□ 0.75
APEX1P27695 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APEX1P27695 AC242852.2-201ENST00000615738 1807 ntBASIC19.76■□□□□ 0.75
APEX1P27695 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
APEX1P27695 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APEX1P27695 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APEX1P27695 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.76■□□□□ 0.75
APEX1P27695 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
APEX1P27695 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.76■□□□□ 0.75
APEX1P27695 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.76■□□□□ 0.75
APEX1P27695 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.76■□□□□ 0.75
APEX1P27695 AC019069.1-201ENST00000610008 1333 ntBASIC19.76■□□□□ 0.75
APEX1P27695 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APEX1P27695 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APEX1P27695 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
APEX1P27695 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APEX1P27695 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APEX1P27695 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
APEX1P27695 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms