Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP24386 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 AL512631.2-201ENST00000604634 923 ntBASIC20.57■□□□□ 0.88
CHMP24386 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP24386 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP24386 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.56■□□□□ 0.88
CHMP24386 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP24386 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.56■□□□□ 0.88
CHMP24386 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP24386 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHMP24386 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.55■□□□□ 0.88
CHMP24386 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP24386 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.55■□□□□ 0.88
CHMP24386 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP24386 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP24386 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP24386 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP24386 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP24386 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.55■□□□□ 0.88
CHMP24386 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP24386 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHMP24386 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP24386 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CHMP24386 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP24386 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP24386 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP24386 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMP24386 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHMP24386 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP24386 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP24386 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP24386 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP24386 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP24386 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP24386 AC242852.2-201ENST00000615738 1807 ntBASIC20.53■□□□□ 0.88
CHMP24386 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP24386 AL136116.3-201ENST00000402907 1138 ntBASIC20.53■□□□□ 0.88
CHMP24386 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP24386 MIR4466-201ENST00000606121 54 ntBASIC20.53■□□□□ 0.88
CHMP24386 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.53■□□□□ 0.88
CHMP24386 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP24386 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP24386 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP24386 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CHMP24386 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHMP24386 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP24386 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP24386 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMP24386 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP24386 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP24386 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHMP24386 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP24386 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMP24386 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.52■□□□□ 0.88
CHMP24386 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP24386 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.52■□□□□ 0.88
CHMP24386 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHMP24386 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP24386 ESRRAP2-201ENST00000418437 1549 ntBASIC20.52■□□□□ 0.87
CHMP24386 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP24386 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP24386 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP24386 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP24386 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHMP24386 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHMP24386 AL024507.2-201ENST00000606070 2574 ntBASIC20.5■□□□□ 0.87
CHMP24386 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP24386 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP24386 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP24386 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP24386 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP24386 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP24386 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP24386 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP24386 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP24386 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP24386 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP24386 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP24386 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CHMP24386 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP24386 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP24386 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHMP24386 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms