Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF4P23510 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF4P23510 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF4P23510 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF4P23510 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF4P23510 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF4P23510 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF4P23510 AL355001.2-201ENST00000620617 1191 ntBASIC18.82■□□□□ 0.6
TNFSF4P23510 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF4P23510 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF4P23510 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TNFSF4P23510 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF4P23510 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF4P23510 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.81■□□□□ 0.6
TNFSF4P23510 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TNFSF4P23510 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF4P23510 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNFSF4P23510 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF4P23510 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF4P23510 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF4P23510 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF4P23510 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF4P23510 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF4P23510 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF4P23510 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF4P23510 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF4P23510 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF4P23510 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF4P23510 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF4P23510 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF4P23510 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF4P23510 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
TNFSF4P23510 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF4P23510 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.79■□□□□ 0.6
TNFSF4P23510 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF4P23510 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TNFSF4P23510 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TNFSF4P23510 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TNFSF4P23510 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TNFSF4P23510 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF4P23510 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF4P23510 MIR638-201ENST00000385237 100 ntBASIC18.78■□□□□ 0.6
TNFSF4P23510 AC142381.2-201ENST00000566120 298 ntBASIC18.78■□□□□ 0.6
TNFSF4P23510 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF4P23510 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
TNFSF4P23510 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF4P23510 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF4P23510 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF4P23510 AC004687.1-201ENST00000579003 1625 ntBASIC18.78■□□□□ 0.6
TNFSF4P23510 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF4P23510 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF4P23510 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF4P23510 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF4P23510 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF4P23510 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF4P23510 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TNFSF4P23510 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.77■□□□□ 0.6
TNFSF4P23510 AC027682.1-201ENST00000562846 899 ntBASIC18.77■□□□□ 0.6
TNFSF4P23510 AC005837.3-201ENST00000612163 286 ntBASIC18.77■□□□□ 0.6
TNFSF4P23510 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF4P23510 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TNFSF4P23510 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
TNFSF4P23510 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF4P23510 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TNFSF4P23510 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.76■□□□□ 0.59
TNFSF4P23510 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 DUSP8P3-201ENST00000399571 1760 ntBASIC18.76■□□□□ 0.59
TNFSF4P23510 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF4P23510 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TNFSF4P23510 BX842568.3-201ENST00000418104 571 ntBASIC18.76■□□□□ 0.59
TNFSF4P23510 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.76■□□□□ 0.59
TNFSF4P23510 OR2I1P-207ENST00000453522 948 ntBASIC18.76■□□□□ 0.59
TNFSF4P23510 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF4P23510 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TNFSF4P23510 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF4P23510 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF4P23510 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFSF4P23510 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF4P23510 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFSF4P23510 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFSF4P23510 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFSF4P23510 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.75■□□□□ 0.59
TNFSF4P23510 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFSF4P23510 AC233992.3-201ENST00000607491 485 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms