Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP3CBP16298 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP3CBP16298 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP3CBP16298 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PPP3CBP16298 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP3CBP16298 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP3CBP16298 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP3CBP16298 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP3CBP16298 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP3CBP16298 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP3CBP16298 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP3CBP16298 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.65■□□□□ 0.74
PPP3CBP16298 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PPP3CBP16298 AC004812.2-201ENST00000611079 2094 ntBASIC19.64■□□□□ 0.74
PPP3CBP16298 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPP3CBP16298 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PPP3CBP16298 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PPP3CBP16298 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.64■□□□□ 0.73
PPP3CBP16298 AC006455.2-201ENST00000429931 906 ntBASIC19.64■□□□□ 0.73
PPP3CBP16298 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.64■□□□□ 0.73
PPP3CBP16298 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PPP3CBP16298 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPP3CBP16298 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PPP3CBP16298 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.63■□□□□ 0.73
PPP3CBP16298 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PPP3CBP16298 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 BX842568.3-201ENST00000418104 571 ntBASIC19.63■□□□□ 0.73
PPP3CBP16298 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.63■□□□□ 0.73
PPP3CBP16298 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.63■□□□□ 0.73
PPP3CBP16298 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.63■□□□□ 0.73
PPP3CBP16298 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PPP3CBP16298 AC008764.7-201ENST00000593779 1081 ntBASIC19.63■□□□□ 0.73
PPP3CBP16298 AC233992.3-201ENST00000607491 485 ntBASIC19.63■□□□□ 0.73
PPP3CBP16298 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PPP3CBP16298 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
PPP3CBP16298 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPP3CBP16298 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.62■□□□□ 0.73
PPP3CBP16298 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.62■□□□□ 0.73
PPP3CBP16298 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PPP3CBP16298 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PPP3CBP16298 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PPP3CBP16298 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPP3CBP16298 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PPP3CBP16298 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PPP3CBP16298 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.61■□□□□ 0.73
PPP3CBP16298 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPP3CBP16298 AC099791.1-201ENST00000416440 715 ntBASIC19.61■□□□□ 0.73
PPP3CBP16298 pRNA.6-201ENST00000610482 90 ntBASIC19.61■□□□□ 0.73
PPP3CBP16298 pRNA.5-201ENST00000612139 90 ntBASIC19.61■□□□□ 0.73
PPP3CBP16298 pRNA.11-201ENST00000618423 90 ntBASIC19.61■□□□□ 0.73
PPP3CBP16298 pRNA.13-201ENST00000619112 90 ntBASIC19.61■□□□□ 0.73
PPP3CBP16298 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.61■□□□□ 0.73
PPP3CBP16298 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PPP3CBP16298 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.6■□□□□ 0.73
PPP3CBP16298 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.6■□□□□ 0.73
PPP3CBP16298 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PPP3CBP16298 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms