Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGN1P05114 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGN1P05114 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGN1P05114 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.95■□□□□ 0.78
HMGN1P05114 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGN1P05114 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGN1P05114 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HMGN1P05114 FP325331.1-202ENST00000623531 1380 ntBASIC19.95■□□□□ 0.78
HMGN1P05114 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGN1P05114 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 LINC01529-204ENST00000636474 1715 ntBASIC19.94■□□□□ 0.78
HMGN1P05114 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGN1P05114 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGN1P05114 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGN1P05114 MIR4508-201ENST00000584178 70 ntBASIC19.94■□□□□ 0.78
HMGN1P05114 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGN1P05114 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGN1P05114 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGN1P05114 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGN1P05114 TSPY13P-201ENST00000338964 914 ntBASIC19.93■□□□□ 0.78
HMGN1P05114 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGN1P05114 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.93■□□□□ 0.78
HMGN1P05114 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGN1P05114 AC007375.3-201ENST00000600936 2314 ntBASIC19.93■□□□□ 0.78
HMGN1P05114 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGN1P05114 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGN1P05114 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HMGN1P05114 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGN1P05114 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGN1P05114 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGN1P05114 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGN1P05114 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGN1P05114 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGN1P05114 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGN1P05114 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HMGN1P05114 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HMGN1P05114 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HMGN1P05114 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HMGN1P05114 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGN1P05114 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGN1P05114 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGN1P05114 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGN1P05114 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HMGN1P05114 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGN1P05114 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HMGN1P05114 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGN1P05114 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGN1P05114 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGN1P05114 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGN1P05114 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGN1P05114 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGN1P05114 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGN1P05114 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HMGN1P05114 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HMGN1P05114 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HMGN1P05114 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HMGN1P05114 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGN1P05114 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGN1P05114 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
HMGN1P05114 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGN1P05114 AC005703.6-201ENST00000623265 1329 ntBASIC19.88■□□□□ 0.77
HMGN1P05114 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms