Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQB1P01920 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB1P01920 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB1P01920 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB1P01920 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB1P01920 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQB1P01920 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DQB1P01920 AC133552.2-201ENST00000619106 1032 ntBASIC19.08■□□□□ 0.64
HLA-DQB1P01920 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB1P01920 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB1P01920 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQB1P01920 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DQB1P01920 AL157384.1-201ENST00000445995 2473 ntBASIC19.08■□□□□ 0.64
HLA-DQB1P01920 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQB1P01920 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 AC244015.2-201ENST00000616358 1861 ntBASIC19.06■□□□□ 0.64
HLA-DQB1P01920 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 RNF165-205ENST00000588679 2904 ntBASIC19.06■□□□□ 0.64
HLA-DQB1P01920 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HLA-DQB1P01920 AL353803.4-201ENST00000565882 1934 ntBASIC19.06■□□□□ 0.64
HLA-DQB1P01920 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQB1P01920 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQB1P01920 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQB1P01920 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQB1P01920 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms