Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ABCA1O95477 AC026185.1-201ENST00000445748 174 ntBASIC18.44■□□□□ 0.54
ABCA1O95477 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.44■□□□□ 0.54
ABCA1O95477 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCA1O95477 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.44■□□□□ 0.54
ABCA1O95477 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCA1O95477 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCA1O95477 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ABCA1O95477 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
ABCA1O95477 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCA1O95477 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCA1O95477 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCA1O95477 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCA1O95477 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCA1O95477 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCA1O95477 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ABCA1O95477 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCA1O95477 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA1O95477 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ABCA1O95477 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCA1O95477 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.42■□□□□ 0.54
ABCA1O95477 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ABCA1O95477 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ABCA1O95477 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.42■□□□□ 0.54
ABCA1O95477 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.42■□□□□ 0.54
ABCA1O95477 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCA1O95477 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCA1O95477 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCA1O95477 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.42■□□□□ 0.54
ABCA1O95477 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.42■□□□□ 0.54
ABCA1O95477 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCA1O95477 AC006015.1-201ENST00000429970 570 ntBASIC18.42■□□□□ 0.54
ABCA1O95477 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ABCA1O95477 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 ALDH1A3-203ENST00000557963 1670 ntBASIC18.41■□□□□ 0.54
ABCA1O95477 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.41■□□□□ 0.54
ABCA1O95477 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ABCA1O95477 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ABCA1O95477 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.41■□□□□ 0.54
ABCA1O95477 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ABCA1O95477 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCA1O95477 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCA1O95477 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCA1O95477 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.4■□□□□ 0.54
ABCA1O95477 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 AL161729.1-201ENST00000604104 1402 ntBASIC18.4■□□□□ 0.54
ABCA1O95477 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA1O95477 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCA1O95477 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
ABCA1O95477 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
ABCA1O95477 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ABCA1O95477 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ABCA1O95477 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.39■□□□□ 0.54
ABCA1O95477 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCA1O95477 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCA1O95477 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCA1O95477 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ABCA1O95477 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCA1O95477 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCA1O95477 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.39■□□□□ 0.53
ABCA1O95477 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCA1O95477 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCA1O95477 TPRG1LP1-201ENST00000598702 760 ntBASIC18.39■□□□□ 0.53
ABCA1O95477 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCA1O95477 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCA1O95477 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCA1O95477 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCA1O95477 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.38■□□□□ 0.53
ABCA1O95477 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
ABCA1O95477 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCA1O95477 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCA1O95477 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.38■□□□□ 0.53
ABCA1O95477 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
ABCA1O95477 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms