Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTN3O95197 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.25■■□□□ 1.31
RTN3O95197 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.25■■□□□ 1.31
RTN3O95197 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.25■■□□□ 1.31
RTN3O95197 AC010525.1-201ENST00000585559 441 ntBASIC23.25■■□□□ 1.31
RTN3O95197 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTN3O95197 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
RTN3O95197 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTN3O95197 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTN3O95197 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RTN3O95197 ANOS2P-203ENST00000472227 1816 ntBASIC23.24■■□□□ 1.31
RTN3O95197 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RTN3O95197 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.24■■□□□ 1.31
RTN3O95197 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RTN3O95197 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTN3O95197 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTN3O95197 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
RTN3O95197 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RTN3O95197 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.24■■□□□ 1.31
RTN3O95197 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.24■■□□□ 1.31
RTN3O95197 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTN3O95197 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.23■■□□□ 1.31
RTN3O95197 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.23■■□□□ 1.31
RTN3O95197 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
RTN3O95197 AC092068.2-201ENST00000590491 1708 ntBASIC23.23■■□□□ 1.31
RTN3O95197 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RTN3O95197 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.23■■□□□ 1.31
RTN3O95197 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTN3O95197 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.23■■□□□ 1.31
RTN3O95197 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTN3O95197 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTN3O95197 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RTN3O95197 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.22■■□□□ 1.31
RTN3O95197 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTN3O95197 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTN3O95197 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTN3O95197 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.22■■□□□ 1.31
RTN3O95197 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTN3O95197 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RTN3O95197 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.22■■□□□ 1.31
RTN3O95197 IGHV3-19-201ENST00000521488 291 ntBASIC23.22■■□□□ 1.31
RTN3O95197 AP005435.1-201ENST00000529293 1178 ntBASIC23.22■■□□□ 1.31
RTN3O95197 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.22■■□□□ 1.31
RTN3O95197 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.22■■□□□ 1.31
RTN3O95197 TSPY26P-201ENST00000476365 1326 ntBASIC23.22■■□□□ 1.31
RTN3O95197 AC004687.1-201ENST00000579003 1625 ntBASIC23.22■■□□□ 1.31
RTN3O95197 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
RTN3O95197 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
RTN3O95197 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.21■■□□□ 1.31
RTN3O95197 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RTN3O95197 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTN3O95197 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTN3O95197 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.2■■□□□ 1.3
RTN3O95197 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTN3O95197 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.2■■□□□ 1.3
RTN3O95197 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTN3O95197 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTN3O95197 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
RTN3O95197 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.2■■□□□ 1.3
RTN3O95197 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RTN3O95197 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.19■■□□□ 1.3
RTN3O95197 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN3O95197 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN3O95197 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN3O95197 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN3O95197 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN3O95197 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTN3O95197 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
RTN3O95197 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RTN3O95197 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
RTN3O95197 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RTN3O95197 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.18■■□□□ 1.3
RTN3O95197 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTN3O95197 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RTN3O95197 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.18■■□□□ 1.3
RTN3O95197 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN3O95197 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN3O95197 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN3O95197 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RTN3O95197 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RTN3O95197 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.17■■□□□ 1.3
RTN3O95197 RARRES2P6-201ENST00000567333 442 ntBASIC23.17■■□□□ 1.3
RTN3O95197 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTN3O95197 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN3O95197 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RTN3O95197 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTN3O95197 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.17■■□□□ 1.3
RTN3O95197 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTN3O95197 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.16■■□□□ 1.3
RTN3O95197 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RTN3O95197 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms