Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AC068473.5-201ENST00000616428 2072 ntBASIC25.1■■□□□ 1.61
CCNT1O60563 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCNT1O60563 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CCNT1O60563 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.1■■□□□ 1.61
CCNT1O60563 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.1■■□□□ 1.61
CCNT1O60563 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
CCNT1O60563 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCNT1O60563 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CCNT1O60563 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCNT1O60563 C1orf229-201ENST00000623686 2258 ntBASIC25.1■■□□□ 1.61
CCNT1O60563 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNT1O60563 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNT1O60563 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNT1O60563 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNT1O60563 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.09■■□□□ 1.61
CCNT1O60563 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.09■■□□□ 1.61
CCNT1O60563 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCNT1O60563 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
CCNT1O60563 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.09■■□□□ 1.61
CCNT1O60563 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CCNT1O60563 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCNT1O60563 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
CCNT1O60563 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.08■■□□□ 1.61
CCNT1O60563 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCNT1O60563 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CCNT1O60563 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCNT1O60563 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.08■■□□□ 1.61
CCNT1O60563 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CCNT1O60563 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCNT1O60563 MIR4767-201ENST00000582827 78 ntBASIC25.08■■□□□ 1.61
CCNT1O60563 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CCNT1O60563 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCNT1O60563 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
CCNT1O60563 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
CCNT1O60563 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.08■■□□□ 1.6
CCNT1O60563 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.07■■□□□ 1.6
CCNT1O60563 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.07■■□□□ 1.6
CCNT1O60563 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CCNT1O60563 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 AL139246.5-201ENST00000606645 996 ntBASIC25.07■■□□□ 1.6
CCNT1O60563 AC106739.1-201ENST00000617035 715 ntBASIC25.07■■□□□ 1.6
CCNT1O60563 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CCNT1O60563 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCNT1O60563 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.07■■□□□ 1.6
CCNT1O60563 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCNT1O60563 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.06■■□□□ 1.6
CCNT1O60563 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.06■■□□□ 1.6
CCNT1O60563 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCNT1O60563 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCNT1O60563 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNT1O60563 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.05■■□□□ 1.6
CCNT1O60563 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNT1O60563 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.05■■□□□ 1.6
CCNT1O60563 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.05■■□□□ 1.6
CCNT1O60563 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.05■■□□□ 1.6
CCNT1O60563 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNT1O60563 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCNT1O60563 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCNT1O60563 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CCNT1O60563 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.04■■□□□ 1.6
CCNT1O60563 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CCNT1O60563 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.04■■□□□ 1.6
CCNT1O60563 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCNT1O60563 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CCNT1O60563 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNT1O60563 AC133561.1-201ENST00000568600 2415 ntBASIC25.03■■□□□ 1.6
CCNT1O60563 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNT1O60563 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNT1O60563 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNT1O60563 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNT1O60563 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCNT1O60563 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.03■■□□□ 1.6
CCNT1O60563 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCNT1O60563 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNT1O60563 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNT1O60563 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNT1O60563 AC010525.1-201ENST00000585559 441 ntBASIC25.02■■□□□ 1.6
CCNT1O60563 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.02■■□□□ 1.6
CCNT1O60563 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNT1O60563 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.02■■□□□ 1.6
CCNT1O60563 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.02■■□□□ 1.6
CCNT1O60563 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNT1O60563 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCNT1O60563 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.02■■□□□ 1.6
CCNT1O60563 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CCNT1O60563 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CCNT1O60563 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
CCNT1O60563 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCNT1O60563 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms