Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
KCNAB3O43448 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
KCNAB3O43448 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.6■□□□□ 0.57
KCNAB3O43448 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNAB3O43448 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNAB3O43448 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.6■□□□□ 0.57
KCNAB3O43448 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.6■□□□□ 0.57
KCNAB3O43448 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.6■□□□□ 0.57
KCNAB3O43448 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.6■□□□□ 0.57
KCNAB3O43448 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KCNAB3O43448 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNAB3O43448 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNAB3O43448 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KCNAB3O43448 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.6■□□□□ 0.57
KCNAB3O43448 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
KCNAB3O43448 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.59■□□□□ 0.57
KCNAB3O43448 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 KRT18P24-201ENST00000344739 1156 ntBASIC18.59■□□□□ 0.57
KCNAB3O43448 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.59■□□□□ 0.57
KCNAB3O43448 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KCNAB3O43448 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KCNAB3O43448 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.58■□□□□ 0.57
KCNAB3O43448 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
KCNAB3O43448 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
KCNAB3O43448 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
KCNAB3O43448 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
KCNAB3O43448 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KCNAB3O43448 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
KCNAB3O43448 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.58■□□□□ 0.56
KCNAB3O43448 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
KCNAB3O43448 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.57■□□□□ 0.56
KCNAB3O43448 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
KCNAB3O43448 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 PKD1P6-201ENST00000343738 4769 ntBASIC18.57■□□□□ 0.56
KCNAB3O43448 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.57■□□□□ 0.56
KCNAB3O43448 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.57■□□□□ 0.56
KCNAB3O43448 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
KCNAB3O43448 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
KCNAB3O43448 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.57■□□□□ 0.56
KCNAB3O43448 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.56■□□□□ 0.56
KCNAB3O43448 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.56■□□□□ 0.56
KCNAB3O43448 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
KCNAB3O43448 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.56■□□□□ 0.56
KCNAB3O43448 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.56■□□□□ 0.56
KCNAB3O43448 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
KCNAB3O43448 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KCNAB3O43448 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.56■□□□□ 0.56
KCNAB3O43448 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
KCNAB3O43448 AC242852.2-201ENST00000615738 1807 ntBASIC18.56■□□□□ 0.56
KCNAB3O43448 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.55■□□□□ 0.56
KCNAB3O43448 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
KCNAB3O43448 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.55■□□□□ 0.56
KCNAB3O43448 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
KCNAB3O43448 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 TSPY9P-201ENST00000440215 945 ntBASIC18.55■□□□□ 0.56
KCNAB3O43448 TSPY11P-201ENST00000442607 1045 ntBASIC18.55■□□□□ 0.56
KCNAB3O43448 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.55■□□□□ 0.56
KCNAB3O43448 AC120024.1-201ENST00000562672 995 ntBASIC18.55■□□□□ 0.56
KCNAB3O43448 AC133561.4-201ENST00000566112 224 ntBASIC18.55■□□□□ 0.56
KCNAB3O43448 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KCNAB3O43448 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.54■□□□□ 0.56
KCNAB3O43448 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
KCNAB3O43448 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KCNAB3O43448 BX664725.1-201ENST00000438252 379 ntBASIC18.54■□□□□ 0.56
KCNAB3O43448 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.54■□□□□ 0.56
KCNAB3O43448 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KCNAB3O43448 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KCNAB3O43448 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms