Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD3EAPO15446 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22■■□□□ 1.11
CD3EAPO15446 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22■■□□□ 1.11
CD3EAPO15446 AC099791.2-201ENST00000605725 427 ntBASIC22■■□□□ 1.11
CD3EAPO15446 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22■■□□□ 1.11
CD3EAPO15446 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CD3EAPO15446 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22■■□□□ 1.11
CD3EAPO15446 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22■■□□□ 1.11
CD3EAPO15446 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD3EAPO15446 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD3EAPO15446 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CD3EAPO15446 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.99■■□□□ 1.11
CD3EAPO15446 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CD3EAPO15446 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CD3EAPO15446 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.99■■□□□ 1.11
CD3EAPO15446 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.99■■□□□ 1.11
CD3EAPO15446 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.99■■□□□ 1.11
CD3EAPO15446 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD3EAPO15446 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.99■■□□□ 1.11
CD3EAPO15446 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD3EAPO15446 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CD3EAPO15446 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CD3EAPO15446 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CD3EAPO15446 AC087742.1-201ENST00000575880 1738 ntBASIC21.98■■□□□ 1.11
CD3EAPO15446 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CD3EAPO15446 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 AC006455.2-201ENST00000429931 906 ntBASIC21.98■■□□□ 1.11
CD3EAPO15446 SRD5A1P1-201ENST00000442297 786 ntBASIC21.98■■□□□ 1.11
CD3EAPO15446 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.98■■□□□ 1.11
CD3EAPO15446 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD3EAPO15446 AC127496.7-201ENST00000625110 1798 ntBASIC21.97■■□□□ 1.11
CD3EAPO15446 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CD3EAPO15446 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.97■■□□□ 1.11
CD3EAPO15446 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.97■■□□□ 1.11
CD3EAPO15446 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.97■■□□□ 1.11
CD3EAPO15446 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.97■■□□□ 1.11
CD3EAPO15446 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD3EAPO15446 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD3EAPO15446 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CD3EAPO15446 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.96■■□□□ 1.11
CD3EAPO15446 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD3EAPO15446 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.96■■□□□ 1.11
CD3EAPO15446 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD3EAPO15446 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD3EAPO15446 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD3EAPO15446 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.96■■□□□ 1.11
CD3EAPO15446 AC079834.2-201ENST00000609776 1949 ntBASIC21.96■■□□□ 1.11
CD3EAPO15446 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD3EAPO15446 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CD3EAPO15446 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CD3EAPO15446 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.95■■□□□ 1.1
CD3EAPO15446 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CD3EAPO15446 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.95■■□□□ 1.1
CD3EAPO15446 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CD3EAPO15446 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3EAPO15446 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3EAPO15446 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.95■■□□□ 1.1
CD3EAPO15446 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.95■■□□□ 1.1
CD3EAPO15446 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3EAPO15446 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD3EAPO15446 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CD3EAPO15446 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD3EAPO15446 LINC01960-201ENST00000563759 1884 ntBASIC21.94■■□□□ 1.1
CD3EAPO15446 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD3EAPO15446 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.94■■□□□ 1.1
CD3EAPO15446 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD3EAPO15446 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CD3EAPO15446 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CD3EAPO15446 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.94■■□□□ 1.1
CD3EAPO15446 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.94■■□□□ 1.1
CD3EAPO15446 pRNA.6-201ENST00000610482 90 ntBASIC21.94■■□□□ 1.1
CD3EAPO15446 pRNA.5-201ENST00000612139 90 ntBASIC21.94■■□□□ 1.1
CD3EAPO15446 pRNA.11-201ENST00000618423 90 ntBASIC21.94■■□□□ 1.1
CD3EAPO15446 pRNA.13-201ENST00000619112 90 ntBASIC21.94■■□□□ 1.1
CD3EAPO15446 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.94■■□□□ 1.1
CD3EAPO15446 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.94■■□□□ 1.1
CD3EAPO15446 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD3EAPO15446 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CD3EAPO15446 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms