Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3D1O14617 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3D1O14617 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.53■□□□□ 0.88
AP3D1O14617 UNC93B8-201ENST00000511903 705 ntBASIC20.53■□□□□ 0.88
AP3D1O14617 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP3D1O14617 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
AP3D1O14617 ESRRAP2-201ENST00000418437 1549 ntBASIC20.53■□□□□ 0.88
AP3D1O14617 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.52■□□□□ 0.88
AP3D1O14617 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.52■□□□□ 0.88
AP3D1O14617 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.52■□□□□ 0.88
AP3D1O14617 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
AP3D1O14617 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
AP3D1O14617 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP3D1O14617 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP3D1O14617 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
AP3D1O14617 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
AP3D1O14617 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.51■□□□□ 0.87
AP3D1O14617 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.51■□□□□ 0.87
AP3D1O14617 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
AP3D1O14617 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP3D1O14617 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP3D1O14617 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP3D1O14617 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
AP3D1O14617 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.5■□□□□ 0.87
AP3D1O14617 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.5■□□□□ 0.87
AP3D1O14617 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
AP3D1O14617 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP3D1O14617 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
AP3D1O14617 AC144652.1-201ENST00000609974 1624 ntBASIC20.5■□□□□ 0.87
AP3D1O14617 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP3D1O14617 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.5■□□□□ 0.87
AP3D1O14617 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP3D1O14617 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.5■□□□□ 0.87
AP3D1O14617 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP3D1O14617 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.5■□□□□ 0.87
AP3D1O14617 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP3D1O14617 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP3D1O14617 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP3D1O14617 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP3D1O14617 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
AP3D1O14617 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.49■□□□□ 0.87
AP3D1O14617 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP3D1O14617 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AP3D1O14617 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.49■□□□□ 0.87
AP3D1O14617 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
AP3D1O14617 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.48■□□□□ 0.87
AP3D1O14617 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.48■□□□□ 0.87
AP3D1O14617 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AP3D1O14617 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP3D1O14617 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
AP3D1O14617 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP3D1O14617 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.47■□□□□ 0.87
AP3D1O14617 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
AP3D1O14617 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP3D1O14617 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.47■□□□□ 0.87
AP3D1O14617 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP3D1O14617 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
AP3D1O14617 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP3D1O14617 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP3D1O14617 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP3D1O14617 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.46■□□□□ 0.87
AP3D1O14617 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP3D1O14617 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP3D1O14617 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.46■□□□□ 0.87
AP3D1O14617 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.46■□□□□ 0.87
AP3D1O14617 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
AP3D1O14617 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.46■□□□□ 0.87
AP3D1O14617 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.46■□□□□ 0.87
AP3D1O14617 ECEL1P1-201ENST00000373592 1742 ntBASIC20.46■□□□□ 0.87
AP3D1O14617 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.46■□□□□ 0.87
AP3D1O14617 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
AP3D1O14617 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP3D1O14617 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
AP3D1O14617 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.45■□□□□ 0.87
AP3D1O14617 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
AP3D1O14617 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.45■□□□□ 0.87
AP3D1O14617 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
AP3D1O14617 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
AP3D1O14617 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
AP3D1O14617 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
AP3D1O14617 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms