Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRAFD1O14545 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.58■■□□□ 1.21
TRAFD1O14545 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAFD1O14545 AC006455.2-201ENST00000429931 906 ntBASIC22.58■■□□□ 1.21
TRAFD1O14545 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRAFD1O14545 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.58■■□□□ 1.21
TRAFD1O14545 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.58■■□□□ 1.21
TRAFD1O14545 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TRAFD1O14545 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.58■■□□□ 1.21
TRAFD1O14545 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.58■■□□□ 1.2
TRAFD1O14545 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAFD1O14545 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRAFD1O14545 AC092171.4-201ENST00000609130 632 ntBASIC22.57■■□□□ 1.2
TRAFD1O14545 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAFD1O14545 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRAFD1O14545 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRAFD1O14545 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRAFD1O14545 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRAFD1O14545 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAFD1O14545 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAFD1O14545 AC096631.2-201ENST00000436136 790 ntBASIC22.56■■□□□ 1.2
TRAFD1O14545 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.56■■□□□ 1.2
TRAFD1O14545 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.56■■□□□ 1.2
TRAFD1O14545 AC110285.6-201ENST00000617652 491 ntBASIC22.56■■□□□ 1.2
TRAFD1O14545 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAFD1O14545 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TRAFD1O14545 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRAFD1O14545 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.56■■□□□ 1.2
TRAFD1O14545 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRAFD1O14545 ANOS2P-203ENST00000472227 1816 ntBASIC22.55■■□□□ 1.2
TRAFD1O14545 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAFD1O14545 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.55■■□□□ 1.2
TRAFD1O14545 DUX4L19-201ENST00000557448 1267 ntBASIC22.55■■□□□ 1.2
TRAFD1O14545 DUX4L4-201ENST00000566884 1269 ntBASIC22.55■■□□□ 1.2
TRAFD1O14545 AC009086.3-201ENST00000623486 1008 ntBASIC22.55■■□□□ 1.2
TRAFD1O14545 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAFD1O14545 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.55■■□□□ 1.2
TRAFD1O14545 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRAFD1O14545 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.55■■□□□ 1.2
TRAFD1O14545 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRAFD1O14545 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAFD1O14545 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 LINC01529-204ENST00000636474 1715 ntBASIC22.54■■□□□ 1.2
TRAFD1O14545 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TRAFD1O14545 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAFD1O14545 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 UNC93B3-201ENST00000308076 687 ntBASIC22.54■■□□□ 1.2
TRAFD1O14545 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAFD1O14545 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.54■■□□□ 1.2
TRAFD1O14545 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.54■■□□□ 1.2
TRAFD1O14545 AC092068.2-201ENST00000590491 1708 ntBASIC22.54■■□□□ 1.2
TRAFD1O14545 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRAFD1O14545 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAFD1O14545 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAFD1O14545 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 SERBP1P1-201ENST00000396021 1160 ntBASIC22.53■■□□□ 1.2
TRAFD1O14545 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAFD1O14545 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAFD1O14545 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAFD1O14545 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 SYT6-210ENST00000641643 1587 ntBASIC22.53■■□□□ 1.2
TRAFD1O14545 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
TRAFD1O14545 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.53■■□□□ 1.2
TRAFD1O14545 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.53■■□□□ 1.2
TRAFD1O14545 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
TRAFD1O14545 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRAFD1O14545 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.52■■□□□ 1.2
TRAFD1O14545 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAFD1O14545 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAFD1O14545 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TRAFD1O14545 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.52■■□□□ 1.2
TRAFD1O14545 AL139246.5-201ENST00000606645 996 ntBASIC22.52■■□□□ 1.2
TRAFD1O14545 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRAFD1O14545 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAFD1O14545 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
TRAFD1O14545 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAFD1O14545 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.52■■□□□ 1.2
TRAFD1O14545 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRAFD1O14545 C1orf229-201ENST00000623686 2258 ntBASIC22.51■■□□□ 1.19
TRAFD1O14545 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms