Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.66■□□□□ 0.74
TVP23AA6NH52 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 RARRES2P1-201ENST00000474487 481 ntBASIC19.66■□□□□ 0.74
TVP23AA6NH52 KRT125P-201ENST00000546827 989 ntBASIC19.66■□□□□ 0.74
TVP23AA6NH52 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TVP23AA6NH52 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TVP23AA6NH52 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
TVP23AA6NH52 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TVP23AA6NH52 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TVP23AA6NH52 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
TVP23AA6NH52 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TVP23AA6NH52 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.65■□□□□ 0.74
TVP23AA6NH52 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TVP23AA6NH52 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TVP23AA6NH52 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TVP23AA6NH52 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TVP23AA6NH52 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
TVP23AA6NH52 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.64■□□□□ 0.74
TVP23AA6NH52 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TVP23AA6NH52 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.64■□□□□ 0.74
TVP23AA6NH52 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.64■□□□□ 0.73
TVP23AA6NH52 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.64■□□□□ 0.73
TVP23AA6NH52 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.64■□□□□ 0.73
TVP23AA6NH52 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TVP23AA6NH52 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TVP23AA6NH52 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TVP23AA6NH52 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TVP23AA6NH52 AC080038.3-201ENST00000623346 1952 ntBASIC19.64■□□□□ 0.73
TVP23AA6NH52 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.64■□□□□ 0.73
TVP23AA6NH52 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.64■□□□□ 0.73
TVP23AA6NH52 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 MTDHP2-201ENST00000601468 714 ntBASIC19.63■□□□□ 0.73
TVP23AA6NH52 MIR4787-201ENST00000607364 84 ntBASIC19.63■□□□□ 0.73
TVP23AA6NH52 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TVP23AA6NH52 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TVP23AA6NH52 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 AC087742.1-201ENST00000575880 1738 ntBASIC19.62■□□□□ 0.73
TVP23AA6NH52 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 AC239859.2-201ENST00000444165 318 ntBASIC19.62■□□□□ 0.73
TVP23AA6NH52 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TVP23AA6NH52 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TVP23AA6NH52 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TVP23AA6NH52 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 FP325331.1-202ENST00000623531 1380 ntBASIC19.61■□□□□ 0.73
TVP23AA6NH52 Z92544.1-202ENST00000571933 1220 ntBASIC19.61■□□□□ 0.73
TVP23AA6NH52 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.61■□□□□ 0.73
TVP23AA6NH52 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TVP23AA6NH52 AC139530.1-201ENST00000575312 1977 ntBASIC19.61■□□□□ 0.73
TVP23AA6NH52 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms