Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHISA3A0PJX4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHISA3A0PJX4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.27■□□□□ 0.67
SHISA3A0PJX4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SHISA3A0PJX4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SHISA3A0PJX4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SHISA3A0PJX4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SHISA3A0PJX4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SHISA3A0PJX4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 AF131216.4-201ENST00000638924 1588 ntBASIC19.24■□□□□ 0.67
SHISA3A0PJX4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
SHISA3A0PJX4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 AC144652.1-201ENST00000609974 1624 ntBASIC19.23■□□□□ 0.67
SHISA3A0PJX4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 AL157384.1-201ENST00000445995 2473 ntBASIC19.23■□□□□ 0.67
SHISA3A0PJX4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
SHISA3A0PJX4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SHISA3A0PJX4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHISA3A0PJX4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms