Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 MIR4449-201ENST00000578365 66 ntBASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
DUXBA0A1W2PPF3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 AC010542.4-201ENST00000563151 1910 ntBASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 AF131216.4-201ENST00000638924 1588 ntBASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 FAM99A-202ENST00000538190 1989 ntBASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.98■□□□□ 0.47
DUXBA0A1W2PPF3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DUXBA0A1W2PPF3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.96■□□□□ 0.47
DUXBA0A1W2PPF3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
DUXBA0A1W2PPF3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.94■□□□□ 0.46
DUXBA0A1W2PPF3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms