Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 LINC00526-201ENST00000581067 1875 ntBASIC17.27■□□□□ 0.35
TRAV30A0A087WSZ9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 MTDHP2-201ENST00000601468 714 ntBASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 AC009086.3-201ENST00000623486 1008 ntBASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV30A0A087WSZ9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV30A0A087WSZ9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 DUX4L4-201ENST00000566884 1269 ntBASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 RNF165-205ENST00000588679 2904 ntBASIC17.24■□□□□ 0.35
TRAV30A0A087WSZ9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV30A0A087WSZ9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 MIR4787-201ENST00000607364 84 ntBASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV30A0A087WSZ9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV30A0A087WSZ9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms