Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.58□□□□□ -0.39
CLK1P49759 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.58□□□□□ -0.39
CLK1P49759 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLK1P49759 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLK1P49759 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.58□□□□□ -0.39
CLK1P49759 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CLK1P49759 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CLK1P49759 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 AL583810.2-201ENST00000556430 3254 ntBASIC12.58□□□□□ -0.4
CLK1P49759 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.58□□□□□ -0.4
CLK1P49759 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.58□□□□□ -0.4
CLK1P49759 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.58□□□□□ -0.4
CLK1P49759 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 KLF17P1-201ENST00000547105 1126 ntBASIC12.58□□□□□ -0.4
CLK1P49759 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.58□□□□□ -0.4
CLK1P49759 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 MIR3940-201ENST00000579148 102 ntBASIC12.58□□□□□ -0.4
CLK1P49759 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 AF254983.2-201ENST00000612331 135 ntBASIC12.58□□□□□ -0.4
CLK1P49759 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CLK1P49759 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 AC010969.2-201ENST00000602458 3231 ntBASIC12.58□□□□□ -0.4
CLK1P49759 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.58□□□□□ -0.4
CLK1P49759 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 AL132642.2-201ENST00000623423 1998 ntBASIC12.58□□□□□ -0.4
CLK1P49759 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 AC092139.4-201ENST00000624318 2794 ntBASIC12.58□□□□□ -0.4
CLK1P49759 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLK1P49759 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.58□□□□□ -0.4
CLK1P49759 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 AL359510.2-201ENST00000624958 2249 ntBASIC12.57□□□□□ -0.4
CLK1P49759 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 CTAGE13P-201ENST00000416709 2446 ntBASIC12.57□□□□□ -0.4
CLK1P49759 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 OR2K2-202ENST00000374428 1038 ntBASIC12.57□□□□□ -0.4
CLK1P49759 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CLK1P49759 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.57□□□□□ -0.4
CLK1P49759 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.57□□□□□ -0.4
CLK1P49759 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.57□□□□□ -0.4
CLK1P49759 RN7SL767P-201ENST00000493013 295 ntBASIC12.57□□□□□ -0.4
CLK1P49759 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
CLK1P49759 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.57□□□□□ -0.4
CLK1P49759 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 MIR4265-201ENST00000582152 99 ntBASIC12.57□□□□□ -0.4
CLK1P49759 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.57□□□□□ -0.4
CLK1P49759 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.57□□□□□ -0.4
CLK1P49759 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CLK1P49759 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLK1P49759 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms