Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
P04436 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P04436 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P04436 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC12.1□□□□□ -0.47
P04436 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 GGT8P-201ENST00000418938 532 ntBASIC12.1□□□□□ -0.47
P04436 AC004522.1-201ENST00000419978 654 ntBASIC12.1□□□□□ -0.47
P04436 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC12.1□□□□□ -0.47
P04436 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P04436 DDX39AP1-201ENST00000445147 1181 ntBASIC12.1□□□□□ -0.47
P04436 AC114781.1-201ENST00000450559 1028 ntBASIC12.1□□□□□ -0.47
P04436 PPOX-204ENST00000462866 473 ntTSL 5 BASIC12.1□□□□□ -0.47
P04436 AC093700.1-201ENST00000503348 717 ntBASIC12.1□□□□□ -0.47
P04436 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.1□□□□□ -0.47
P04436 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC12.1□□□□□ -0.47
P04436 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.1□□□□□ -0.47
P04436 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC12.1□□□□□ -0.47
P04436 RN7SL596P-201ENST00000582123 288 ntBASIC12.1□□□□□ -0.47
P04436 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.1□□□□□ -0.47
P04436 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 AC117500.5-201ENST00000623233 527 ntBASIC12.1□□□□□ -0.47
P04436 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.1□□□□□ -0.47
P04436 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P04436 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.1□□□□□ -0.47
P04436 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
P04436 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P04436 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC12.1□□□□□ -0.47
P04436 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
P04436 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
P04436 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 FAM226B-201ENST00000602508 1490 ntBASIC12.09□□□□□ -0.47
P04436 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04436 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC12.09□□□□□ -0.47
P04436 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
P04436 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
P04436 DDC-206ENST00000431062 1620 ntTSL 5 BASIC12.09□□□□□ -0.47
P04436 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04436 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC12.09□□□□□ -0.47
P04436 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P04436 SERF2-205ENST00000403425 690 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC12.09□□□□□ -0.47
P04436 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC12.09□□□□□ -0.47
P04436 CDCA4P4-201ENST00000435216 680 ntBASIC12.09□□□□□ -0.47
P04436 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
P04436 HNRNPA1P10-201ENST00000444945 962 ntBASIC12.09□□□□□ -0.47
P04436 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC12.09□□□□□ -0.47
P04436 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 AC012158.2-201ENST00000536546 354 ntBASIC12.09□□□□□ -0.47
P04436 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P04436 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC12.09□□□□□ -0.47
P04436 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
P04436 AL118516.1-201ENST00000564152 670 ntBASIC12.09□□□□□ -0.47
P04436 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.09□□□□□ -0.47
P04436 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms