Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 HERC2P10-201ENST00000570209 2393 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 NBN-203ENST00000409330 4523 ntTSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 WASH7P-201ENST00000488147 1351 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SNORA57-201ENST00000383870 149 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC103563.1-201ENST00000429316 123 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 KRT19P4-201ENST00000443208 943 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC104212.2-201ENST00000478813 628 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC079414.2-201ENST00000567157 1104 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC006116.2-201ENST00000589958 988 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC048382.6-201ENST00000621980 1223 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AL805961.2-201ENST00000642139 4817 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 AC020931.1-201ENST00000589622 1346 ntBASIC13.12□□□□□ -0.31
SATB2Q9UPW6 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SATB2Q9UPW6 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 HLA-DMA-202ENST00000395303 1007 ntBASIC13.11□□□□□ -0.31
SATB2Q9UPW6 AL157823.1-201ENST00000403727 628 ntBASIC13.11□□□□□ -0.31
SATB2Q9UPW6 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 RPSAP12-201ENST00000435879 888 ntBASIC13.11□□□□□ -0.31
SATB2Q9UPW6 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.11□□□□□ -0.31
SATB2Q9UPW6 AL136084.1-201ENST00000449172 318 ntBASIC13.11□□□□□ -0.31
SATB2Q9UPW6 HIST1H2APS2-201ENST00000454426 370 ntBASIC13.11□□□□□ -0.31
SATB2Q9UPW6 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms