Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
PPP3CAQ08209 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PPP3CAQ08209 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PPP3CAQ08209 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PPP3CAQ08209 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PPP3CAQ08209 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PPP3CAQ08209 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PPP3CAQ08209 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC14.27□□□□□ -0.13
PPP3CAQ08209 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PPP3CAQ08209 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 AQP7P5-201ENST00000428759 1049 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 RPSAP12-201ENST00000435879 888 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 AQP7P4-201ENST00000447083 1042 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 AQP7P2-201ENST00000453967 1041 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 RN7SL494P-201ENST00000461517 304 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 RPSAP67-201ENST00000584105 862 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 AQP7P3-201ENST00000624547 1041 ntBASIC14.26□□□□□ -0.13
PPP3CAQ08209 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PPP3CAQ08209 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC14.26□□□□□ -0.13
PPP3CAQ08209 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 AC015819.3-201ENST00000624305 2674 ntBASIC14.25□□□□□ -0.13
PPP3CAQ08209 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 COQ4-202ENST00000372875 928 ntTSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 GCSHP3-201ENST00000431120 391 ntBASIC14.25□□□□□ -0.13
PPP3CAQ08209 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 PHBP18-201ENST00000546648 813 ntBASIC14.25□□□□□ -0.13
PPP3CAQ08209 URAHP-205ENST00000610227 398 ntBASIC14.25□□□□□ -0.13
PPP3CAQ08209 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PPP3CAQ08209 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
PPP3CAQ08209 TRIM80P-201ENST00000455685 2848 ntBASIC14.25□□□□□ -0.13
PPP3CAQ08209 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms