Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 SLC25A24P2-201ENST00000415059 510 ntBASIC12.6□□□□□ -0.39
CLK1P49759 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.6□□□□□ -0.39
CLK1P49759 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.6□□□□□ -0.39
CLK1P49759 FTH1P22-201ENST00000456305 520 ntBASIC12.6□□□□□ -0.39
CLK1P49759 RN7SL788P-201ENST00000460504 316 ntBASIC12.6□□□□□ -0.39
CLK1P49759 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.6□□□□□ -0.39
CLK1P49759 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CLK1P49759 MIR3677-201ENST00000578964 60 ntBASIC12.6□□□□□ -0.39
CLK1P49759 SIGLEC22P-201ENST00000599104 714 ntBASIC12.6□□□□□ -0.39
CLK1P49759 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.6□□□□□ -0.39
CLK1P49759 AL356740.1-201ENST00000602192 1297 ntBASIC12.6□□□□□ -0.39
CLK1P49759 AC012044.1-201ENST00000603431 297 ntBASIC12.6□□□□□ -0.39
CLK1P49759 AL161773.1-201ENST00000624845 863 ntBASIC12.6□□□□□ -0.39
CLK1P49759 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 KRT8P18-201ENST00000413425 1445 ntBASIC12.6□□□□□ -0.39
CLK1P49759 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.6□□□□□ -0.39
CLK1P49759 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLK1P49759 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.6□□□□□ -0.39
CLK1P49759 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.59□□□□□ -0.39
CLK1P49759 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.59□□□□□ -0.39
CLK1P49759 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 GUCY2EP-203ENST00000531117 1918 ntBASIC12.59□□□□□ -0.39
CLK1P49759 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLK1P49759 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.59□□□□□ -0.39
CLK1P49759 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 AC018638.5-201ENST00000450885 754 ntBASIC12.59□□□□□ -0.39
CLK1P49759 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 RN7SL720P-201ENST00000488178 304 ntBASIC12.59□□□□□ -0.39
CLK1P49759 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.59□□□□□ -0.39
CLK1P49759 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 AC138761.6-201ENST00000583997 1423 ntBASIC12.59□□□□□ -0.39
CLK1P49759 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.59□□□□□ -0.39
CLK1P49759 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.59□□□□□ -0.39
CLK1P49759 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLK1P49759 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms