Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC115284.2-201ENST00000624646 2054 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 PGAM1P7-201ENST00000413837 737 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 LINC00539-202ENST00000423575 699 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 TCP1P1-201ENST00000412860 1610 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AL445989.1-201ENST00000611641 1436 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 MRO-205ENST00000436348 1125 ntTSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RNA5SP520-201ENST00000516506 113 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RNA5SP523-201ENST00000516858 113 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RAD52-212ENST00000541619 560 ntTSL 4 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 ENO1P2-201ENST00000557166 974 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC025580.2-203ENST00000560647 702 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC147067.2-201ENST00000608161 289 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AP000553.1-201ENST00000610143 430 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CAMK2B-201ENST00000258682 1652 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CDC20B-201ENST00000296733 2946 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 MORN4-203ENST00000478953 2225 ntTSL 2 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 BPIFB9P-201ENST00000246222 1178 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 PLA2G1B-201ENST00000308366 565 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC005102.1-201ENST00000403118 479 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AL589843.2-201ENST00000445872 1262 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC233724.12-201ENST00000512227 594 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 LINC02106-202ENST00000513880 225 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC074052.1-201ENST00000567734 456 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 AC003005.2-201ENST00000595422 539 ntTSL 4 BASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 MIR6511B1-201ENST00000612014 85 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 POM121L1P-202ENST00000605258 1835 ntBASIC8.43□□□□□ -1.06
VPS13DQ5THJ4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 C14orf159-202ENST00000298858 642 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 EXOSC1-204ENST00000370902 923 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LST1-206ENST00000376090 689 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LST1-210ENST00000376099 610 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LST1-214ENST00000418507 726 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 OR52P2P-201ENST00000527287 955 ntBASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 AP000897.2-202ENST00000579332 821 ntTSL 3 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 UFSP2-201ENST00000264689 1630 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
VPS13DQ5THJ4 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms