Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 EGLN3-205ENST00000547327 2849 ntBASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NPIPA3F8WFD2 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NPIPA3F8WFD2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NPIPA3F8WFD2 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
NPIPA3F8WFD2 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
NPIPA3F8WFD2 AC114271.1-201ENST00000612689 2813 ntBASIC12.15□□□□□ -0.47
NPIPA3F8WFD2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
NPIPA3F8WFD2 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 GH1-203ENST00000351388 685 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 HDGF-202ENST00000368206 960 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 KRT19P4-201ENST00000443208 943 ntBASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 NDUFB2P1-201ENST00000506966 295 ntBASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 AC091304.3-201ENST00000566500 716 ntBASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPA3F8WFD2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 KRT8P38-201ENST00000441370 1430 ntBASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPA3F8WFD2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms