Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AL049840.2-201ENST00000602722 535 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 AL133467.4-201ENST00000602953 725 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 AL359881.2-201ENST00000602973 570 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC004923.1-202ENST00000642106 209 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 FN1-206ENST00000359671 8524 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AC120024.4-201ENST00000624285 2143 ntBASIC10.84□□□□□ -0.67
RAB40CQ96S21 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC10.84□□□□□ -0.67
RAB40CQ96S21 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RAB40CQ96S21 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
RAB40CQ96S21 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
RAB40CQ96S21 DGKZP1-201ENST00000378718 2776 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 DBIL5P-203ENST00000536214 2677 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 RPL13AP20-201ENST00000459725 609 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 RPSAP36-202ENST00000494591 1261 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AL583810.1-201ENST00000553344 1045 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AC005730.2-201ENST00000564549 1184 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 AL391294.1-201ENST00000641352 4068 ntBASIC10.83□□□□□ -0.68
RAB40CQ96S21 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC10.83□□□□□ -0.68
RAB40CQ96S21 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms