Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 ACTBP9-201ENST00000587663 1099 ntBASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AC011477.7-201ENST00000617163 1440 ntBASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AL021155.1-201ENST00000438808 2637 ntBASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PRICKLE4Q2TBC4 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AC008764.8-201ENST00000623966 2717 ntBASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AL135901.1-201ENST00000451812 333 ntBASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 RN7SL494P-201ENST00000461517 304 ntBASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 URAHP-205ENST00000610227 398 ntBASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PRICKLE4Q2TBC4 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms