Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 HLA-U-204ENST00000418981 186 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 RN7SL186P-201ENST00000466485 297 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 RN7SL386P-201ENST00000485776 297 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AP003717.2-201ENST00000534962 898 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 IGHV1OR16-2-201ENST00000564937 349 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AC140658.2-201ENST00000566360 348 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SUPT20HL1-201ENST00000436466 2618 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 C1R-201ENST00000535233 2211 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 AC007690.1-201ENST00000451924 468 ntBASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 PARVG-208ENST00000466375 820 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 AC125494.1-202ENST00000586338 723 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 AC091905.3-201ENST00000624959 234 ntBASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 PPATP1-201ENST00000496669 1547 ntBASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42BPAQ5VT25 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 AC023347.1-201ENST00000435352 604 ntTSL 4 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 RN7SL148P-201ENST00000467120 279 ntBASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 AP001979.1-201ENST00000529222 751 ntBASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 AC069234.1-201ENST00000542620 583 ntTSL 3 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42BPAQ5VT25 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AC005682.1-201ENST00000452069 1467 ntBASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AC023078.7-201ENST00000532712 961 ntBASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 HNRNPA1P62-201ENST00000559372 952 ntBASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AL356423.1-201ENST00000604953 538 ntBASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 AC012313.9-201ENST00000619318 633 ntBASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42BPAQ5VT25 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms