Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PGAM1P11-201ENST00000416729 680 ntBASIC12.29□□□□□ -0.44
RFC3P40938 AL136084.1-201ENST00000449172 318 ntBASIC12.29□□□□□ -0.44
RFC3P40938 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.29□□□□□ -0.44
RFC3P40938 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.29□□□□□ -0.44
RFC3P40938 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.29□□□□□ -0.44
RFC3P40938 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.29□□□□□ -0.44
RFC3P40938 KNOP1P1-201ENST00000542108 989 ntBASIC12.29□□□□□ -0.44
RFC3P40938 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.29□□□□□ -0.44
RFC3P40938 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.29□□□□□ -0.44
RFC3P40938 RN7SL134P-201ENST00000579756 303 ntBASIC12.29□□□□□ -0.44
RFC3P40938 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.29□□□□□ -0.44
RFC3P40938 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.29□□□□□ -0.44
RFC3P40938 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC12.29□□□□□ -0.44
RFC3P40938 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.29□□□□□ -0.44
RFC3P40938 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RFC3P40938 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 PI4KAP2-201ENST00000360806 2080 ntBASIC12.29□□□□□ -0.44
RFC3P40938 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RFC3P40938 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RFC3P40938 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.29□□□□□ -0.44
RFC3P40938 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RFC3P40938 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RFC3P40938 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 KRT8P38-201ENST00000441370 1430 ntBASIC12.28□□□□□ -0.44
RFC3P40938 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 AC004623.1-201ENST00000624592 2127 ntBASIC12.28□□□□□ -0.44
RFC3P40938 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RFC3P40938 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RFC3P40938 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.28□□□□□ -0.44
RFC3P40938 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.28□□□□□ -0.44
RFC3P40938 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC12.28□□□□□ -0.44
RFC3P40938 AC091304.3-201ENST00000566500 716 ntBASIC12.28□□□□□ -0.44
RFC3P40938 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 NAV1-210ENST00000593583 726 ntBASIC12.28□□□□□ -0.44
RFC3P40938 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 MEP1AP1-201ENST00000636082 1097 ntBASIC12.28□□□□□ -0.44
RFC3P40938 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.28□□□□□ -0.44
RFC3P40938 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RFC3P40938 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RFC3P40938 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.28□□□□□ -0.44
RFC3P40938 AC007336.3-201ENST00000623886 2160 ntBASIC12.28□□□□□ -0.44
RFC3P40938 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.27□□□□□ -0.44
RFC3P40938 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.27□□□□□ -0.44
RFC3P40938 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
RFC3P40938 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.27□□□□□ -0.44
RFC3P40938 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.27□□□□□ -0.44
RFC3P40938 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RFC3P40938 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms