Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
O00370 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
O00370 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
O00370 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
O00370 KRT18P40-201ENST00000599859 1571 ntBASIC14.22□□□□□ -0.13
O00370 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.22□□□□□ -0.13
O00370 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.22□□□□□ -0.13
O00370 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 AC027369.3-201ENST00000530465 3707 ntBASIC14.22□□□□□ -0.13
O00370 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
O00370 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
O00370 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
O00370 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 TPI1P3-201ENST00000335020 740 ntBASIC14.22□□□□□ -0.13
O00370 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 RPL17P11-201ENST00000417593 544 ntBASIC14.22□□□□□ -0.13
O00370 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.22□□□□□ -0.13
O00370 AP000244.1-201ENST00000424582 201 ntBASIC14.22□□□□□ -0.13
O00370 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.22□□□□□ -0.13
O00370 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC14.22□□□□□ -0.13
O00370 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
O00370 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.22□□□□□ -0.13
O00370 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.22□□□□□ -0.13
O00370 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
O00370 MFSD12-215ENST00000615613 688 ntBASIC14.22□□□□□ -0.13
O00370 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
O00370 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 LINC00643-207ENST00000637212 734 ntBASIC14.22□□□□□ -0.13
O00370 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.22□□□□□ -0.13
O00370 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC14.22□□□□□ -0.13
O00370 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.22□□□□□ -0.13
O00370 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
O00370 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
O00370 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC14.21□□□□□ -0.13
O00370 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
O00370 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
O00370 Z98259.1-201ENST00000564261 1697 ntBASIC14.21□□□□□ -0.13
O00370 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC14.21□□□□□ -0.13
O00370 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
O00370 AC022080.1-201ENST00000366255 781 ntBASIC14.21□□□□□ -0.13
O00370 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
O00370 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
O00370 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.21□□□□□ -0.13
O00370 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC14.21□□□□□ -0.13
O00370 PGK1P2-201ENST00000431702 1214 ntBASIC14.21□□□□□ -0.13
O00370 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
O00370 PIN4P1-201ENST00000451079 396 ntBASIC14.21□□□□□ -0.13
O00370 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
O00370 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.21□□□□□ -0.13
O00370 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.21□□□□□ -0.13
O00370 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.21□□□□□ -0.13
O00370 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.21□□□□□ -0.13
O00370 MIR5196-201ENST00000578146 115 ntBASIC14.21□□□□□ -0.13
O00370 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
O00370 MIR7845-201ENST00000618396 99 ntBASIC14.21□□□□□ -0.13
O00370 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.21□□□□□ -0.13
O00370 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.21□□□□□ -0.13
O00370 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.21□□□□□ -0.13
O00370 AC011471.3-201ENST00000623576 402 ntBASIC14.21□□□□□ -0.13
O00370 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.21□□□□□ -0.13
O00370 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.21□□□□□ -0.13
O00370 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
O00370 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
O00370 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms