Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 PCDHA9-201ENST00000378122 6900 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC9.9□□□□□ -0.82
NACAE9PAV3 AL627422.1-201ENST00000434104 580 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 RN7SL8P-201ENST00000461771 266 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC9.9□□□□□ -0.82
NACAE9PAV3 AC019193.1-201ENST00000506678 823 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC9.9□□□□□ -0.82
NACAE9PAV3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 AC005632.3-201ENST00000605544 308 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 MIR6769A-201ENST00000617340 73 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 AC242376.2-201ENST00000619355 883 ntBASIC9.9□□□□□ -0.82
NACAE9PAV3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
NACAE9PAV3 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC9.9□□□□□ -0.82
NACAE9PAV3 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
NACAE9PAV3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC9.9□□□□□ -0.83
NACAE9PAV3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
NACAE9PAV3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
NACAE9PAV3 AC024075.2-201ENST00000598112 1473 ntBASIC9.9□□□□□ -0.83
NACAE9PAV3 AC002350.2-201ENST00000623894 1828 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.89□□□□□ -0.83
NACAE9PAV3 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC9.89□□□□□ -0.83
NACAE9PAV3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
NACAE9PAV3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC9.89□□□□□ -0.83
NACAE9PAV3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC9.89□□□□□ -0.83
NACAE9PAV3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
NACAE9PAV3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC9.89□□□□□ -0.83
NACAE9PAV3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 MIR557-201ENST00000385239 98 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 AL512430.1-201ENST00000392575 860 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 AC098935.1-201ENST00000446057 611 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 MPRIPP1-201ENST00000452433 1089 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 RN7SL258P-201ENST00000478664 300 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
NACAE9PAV3 AL132994.1-201ENST00000554098 400 ntBASIC9.89□□□□□ -0.83
NACAE9PAV3 FOS-204ENST00000554617 796 ntTSL 2 BASIC9.89□□□□□ -0.83
NACAE9PAV3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
NACAE9PAV3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC9.89□□□□□ -0.83
NACAE9PAV3 NDUFB10P1-201ENST00000567319 521 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms