Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SLC1A1P43005 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SLC1A1P43005 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SLC1A1P43005 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SLC1A1P43005 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 TUBB8P5-201ENST00000445286 1351 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SLC1A1P43005 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC1A1P43005 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 RPL29P2-202ENST00000498671 657 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 RNA5SP406-201ENST00000516106 112 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 AC068867.1-201ENST00000559855 150 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.97□□□□□ -0.17
SLC1A1P43005 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 CSTP2-201ENST00000610599 398 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.97□□□□□ -0.17
SLC1A1P43005 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SLC1A1P43005 AC092028.1-202ENST00000641483 3547 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 AC092028.1-201ENST00000641781 3540 ntBASIC13.97□□□□□ -0.17
SLC1A1P43005 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SLC1A1P43005 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SLC1A1P43005 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC1A1P43005 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLC1A1P43005 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC1A1P43005 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 VTI1BP1-201ENST00000486325 700 ntBASIC13.96□□□□□ -0.17
SLC1A1P43005 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC13.96□□□□□ -0.17
SLC1A1P43005 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.96□□□□□ -0.17
SLC1A1P43005 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.96□□□□□ -0.17
SLC1A1P43005 AL139099.5-201ENST00000635274 300 ntBASIC13.96□□□□□ -0.17
SLC1A1P43005 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms