Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC073869.4-201ENST00000620841 800 ntBASIC14.25□□□□□ -0.13
O00370 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.25□□□□□ -0.13
O00370 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
O00370 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
O00370 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
O00370 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
O00370 AL450468.2-201ENST00000565955 1889 ntBASIC14.25□□□□□ -0.13
O00370 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 KRT8P25-201ENST00000473150 1456 ntBASIC14.25□□□□□ -0.13
O00370 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
O00370 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
O00370 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC14.24□□□□□ -0.13
O00370 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
O00370 BX324167.2-201ENST00000623717 3316 ntBASIC14.24□□□□□ -0.13
O00370 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.24□□□□□ -0.13
O00370 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.24□□□□□ -0.13
O00370 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.24□□□□□ -0.13
O00370 AK2-208ENST00000487289 920 ntTSL 2 BASIC14.24□□□□□ -0.13
O00370 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.24□□□□□ -0.13
O00370 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
O00370 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
O00370 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
O00370 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
O00370 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
O00370 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.23□□□□□ -0.13
O00370 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.23□□□□□ -0.13
O00370 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
O00370 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
O00370 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
O00370 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
O00370 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.23□□□□□ -0.13
O00370 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.23□□□□□ -0.13
O00370 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 TBC1D3P6-201ENST00000505954 962 ntBASIC14.23□□□□□ -0.13
O00370 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 FAM213AP2-201ENST00000521579 683 ntBASIC14.23□□□□□ -0.13
O00370 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.23□□□□□ -0.13
O00370 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.23□□□□□ -0.13
O00370 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.23□□□□□ -0.13
O00370 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
O00370 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 AC008972.2-201ENST00000606587 494 ntBASIC14.23□□□□□ -0.13
O00370 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.23□□□□□ -0.13
O00370 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.23□□□□□ -0.13
O00370 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.23□□□□□ -0.13
O00370 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.23□□□□□ -0.13
O00370 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms