Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CNIH4Q9P003 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.6□□□□□ -0.39
CNIH4Q9P003 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CNIH4Q9P003 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CNIH4Q9P003 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC118758.2-201ENST00000614242 2813 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 HSPA8P9-201ENST00000485881 1943 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AL357563.1-201ENST00000404728 395 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC084752.1-201ENST00000509766 622 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 RN7SL556P-201ENST00000582856 298 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 AL118522.1-201ENST00000611368 560 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 AC092115.1-201ENST00000566277 1402 ntBASIC12.59□□□□□ -0.39
CNIH4Q9P003 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CNIH4Q9P003 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CNIH4Q9P003 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CNIH4Q9P003 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CNIH4Q9P003 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CNIH4Q9P003 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 AP000354.1-201ENST00000396982 456 ntBASIC12.58□□□□□ -0.4
CNIH4Q9P003 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 AC041040.1-201ENST00000425197 460 ntBASIC12.58□□□□□ -0.4
CNIH4Q9P003 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CNIH4Q9P003 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.58□□□□□ -0.4
CNIH4Q9P003 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CNIH4Q9P003 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms