Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 GOLGA8UP-201ENST00000527159 1755 ntBASIC11.98□□□□□ -0.49
APOC1P02654 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC1P02654 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC1P02654 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC1P02654 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
APOC1P02654 EEF1DP2-201ENST00000433698 843 ntBASIC11.98□□□□□ -0.49
APOC1P02654 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC1P02654 AP000358.1-201ENST00000456260 156 ntBASIC11.98□□□□□ -0.49
APOC1P02654 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC1P02654 RN7SL11P-201ENST00000471305 293 ntBASIC11.98□□□□□ -0.49
APOC1P02654 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC1P02654 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC11.98□□□□□ -0.49
APOC1P02654 AL109837.1-201ENST00000603272 613 ntBASIC11.98□□□□□ -0.49
APOC1P02654 AC007326.1-201ENST00000604539 458 ntBASIC11.98□□□□□ -0.49
APOC1P02654 AL031673.1-201ENST00000611460 466 ntBASIC11.98□□□□□ -0.49
APOC1P02654 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
APOC1P02654 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 AGGF1P10-201ENST00000635005 2191 ntBASIC11.98□□□□□ -0.49
APOC1P02654 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 AP000437.1-201ENST00000624057 2085 ntBASIC11.98□□□□□ -0.49
APOC1P02654 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
APOC1P02654 AC126564.1-201ENST00000623628 2013 ntBASIC11.98□□□□□ -0.49
APOC1P02654 PCDHA6-201ENST00000378126 3267 ntBASIC11.98□□□□□ -0.49
APOC1P02654 CICP9-201ENST00000444451 1913 ntBASIC11.98□□□□□ -0.49
APOC1P02654 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC1P02654 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC1P02654 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 AC018445.4-201ENST00000624066 2291 ntBASIC11.97□□□□□ -0.49
APOC1P02654 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
APOC1P02654 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC1P02654 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC1P02654 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
APOC1P02654 AL583805.1-201ENST00000391389 531 ntBASIC11.97□□□□□ -0.49
APOC1P02654 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.97□□□□□ -0.49
APOC1P02654 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC11.97□□□□□ -0.49
APOC1P02654 FNTAP2-201ENST00000430308 634 ntBASIC11.97□□□□□ -0.49
APOC1P02654 AC092573.1-201ENST00000433054 884 ntBASIC11.97□□□□□ -0.49
APOC1P02654 AC073150.1-201ENST00000450406 1084 ntBASIC11.97□□□□□ -0.49
APOC1P02654 SCARNA12-201ENST00000459155 270 ntBASIC11.97□□□□□ -0.49
APOC1P02654 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC1P02654 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC1P02654 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC1P02654 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC1P02654 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC11.97□□□□□ -0.49
APOC1P02654 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC1P02654 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 AC026803.1-201ENST00000569130 274 ntBASIC11.97□□□□□ -0.49
APOC1P02654 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.97□□□□□ -0.49
APOC1P02654 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC1P02654 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC1P02654 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms