Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 AL139385.1-201ENST00000611744 3272 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 JAML-211ENST00000533261 1508 ntTSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 AC110048.1-201ENST00000604293 2157 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SCN2BO60939 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SCN2BO60939 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.73□□□□□ -0.37
SCN2BO60939 AC103563.1-201ENST00000429316 123 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 IQSEC3P1-201ENST00000538799 536 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SCN2BO60939 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.73□□□□□ -0.37
SCN2BO60939 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.73□□□□□ -0.37
SCN2BO60939 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.73□□□□□ -0.37
SCN2BO60939 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 AC084346.2-201ENST00000607097 949 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 AL359091.4-201ENST00000610052 409 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 AC026120.2-201ENST00000617239 309 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 GPR182-203ENST00000622922 591 ntBASIC12.73□□□□□ -0.37
SCN2BO60939 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SCN2BO60939 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SCN2BO60939 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SCN2BO60939 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SCN2BO60939 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SCN2BO60939 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.72□□□□□ -0.37
SCN2BO60939 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 AC041040.1-201ENST00000425197 460 ntBASIC12.72□□□□□ -0.37
SCN2BO60939 AC005077.2-201ENST00000449786 690 ntBASIC12.72□□□□□ -0.37
SCN2BO60939 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.72□□□□□ -0.37
SCN2BO60939 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 AC093300.1-201ENST00000510368 1201 ntBASIC12.72□□□□□ -0.37
SCN2BO60939 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.72□□□□□ -0.37
SCN2BO60939 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.72□□□□□ -0.37
SCN2BO60939 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 ACTG1P17-201ENST00000558391 1119 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms