Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KDELR3O43731 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.53□□□□□ -0.24
KDELR3O43731 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 AL136084.1-201ENST00000449172 318 ntBASIC13.53□□□□□ -0.24
KDELR3O43731 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC13.53□□□□□ -0.24
KDELR3O43731 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.53□□□□□ -0.24
KDELR3O43731 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC13.53□□□□□ -0.24
KDELR3O43731 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.53□□□□□ -0.24
KDELR3O43731 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 FO393412.1-201ENST00000619841 382 ntBASIC13.53□□□□□ -0.24
KDELR3O43731 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.53□□□□□ -0.24
KDELR3O43731 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.53□□□□□ -0.24
KDELR3O43731 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC13.53□□□□□ -0.24
KDELR3O43731 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.53□□□□□ -0.24
KDELR3O43731 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.53□□□□□ -0.24
KDELR3O43731 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KDELR3O43731 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
KDELR3O43731 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDELR3O43731 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDELR3O43731 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
KDELR3O43731 AC005252.3-201ENST00000623855 2258 ntBASIC13.52□□□□□ -0.24
KDELR3O43731 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KDELR3O43731 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KDELR3O43731 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
KDELR3O43731 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC13.52□□□□□ -0.25
KDELR3O43731 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 RPS15P5-201ENST00000449885 432 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC13.52□□□□□ -0.25
KDELR3O43731 BCL2L12P1-201ENST00000508390 733 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 AC023968.2-201ENST00000560593 1049 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.52□□□□□ -0.25
KDELR3O43731 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC13.52□□□□□ -0.25
KDELR3O43731 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.52□□□□□ -0.25
KDELR3O43731 Z98257.2-202ENST00000641138 1548 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 AC006144.1-201ENST00000424220 1600 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC13.52□□□□□ -0.25
KDELR3O43731 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 HSPA8P9-201ENST00000485881 1943 ntBASIC13.52□□□□□ -0.25
KDELR3O43731 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
KDELR3O43731 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.52□□□□□ -0.25
KDELR3O43731 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.52□□□□□ -0.25
KDELR3O43731 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
KDELR3O43731 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC13.51□□□□□ -0.25
KDELR3O43731 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.51□□□□□ -0.25
KDELR3O43731 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KDELR3O43731 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms