Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 AL035685.1-201ENST00000636663 812 ntBASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP4B1Q9Y6B7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 AC090877.2-201ENST00000558441 1738 ntBASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 AL121603.2-201ENST00000557373 2117 ntBASIC21.13■□□□□ 0.97
AP4B1Q9Y6B7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
AP4B1Q9Y6B7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 MIR4281-201ENST00000580852 62 ntBASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 AC073130.3-201ENST00000624389 2278 ntBASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 C11orf96-202ENST00000528572 1834 ntBASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.11■□□□□ 0.97
AP4B1Q9Y6B7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 Z92544.1-202ENST00000571933 1220 ntBASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AP4B1Q9Y6B7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
AP4B1Q9Y6B7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 AC137630.3-201ENST00000607245 391 ntBASIC21.08■□□□□ 0.97
AP4B1Q9Y6B7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
AP4B1Q9Y6B7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
AP4B1Q9Y6B7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
AP4B1Q9Y6B7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AP4B1Q9Y6B7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 BX664725.1-201ENST00000438252 379 ntBASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
AP4B1Q9Y6B7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms