Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.4■■□□□ 1.02
SH2B3Q9UQQ2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.4■■□□□ 1.02
SH2B3Q9UQQ2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH2B3Q9UQQ2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2B3Q9UQQ2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH2B3Q9UQQ2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SH2B3Q9UQQ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.39■■□□□ 1.02
SH2B3Q9UQQ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SH2B3Q9UQQ2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 pRNA.6-201ENST00000610482 90 ntBASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 pRNA.5-201ENST00000612139 90 ntBASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 pRNA.11-201ENST00000618423 90 ntBASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 pRNA.13-201ENST00000619112 90 ntBASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 AC004687.1-201ENST00000579003 1625 ntBASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.39■■□□□ 1.01
SH2B3Q9UQQ2 AC008406.3-201ENST00000620001 1374 ntBASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 MIR3181-201ENST00000578512 73 ntBASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 AL499627.2-201ENST00000606283 725 ntBASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH2B3Q9UQQ2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 SERBP1P1-201ENST00000396021 1160 ntBASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH2B3Q9UQQ2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SH2B3Q9UQQ2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH2B3Q9UQQ2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SH2B3Q9UQQ2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2B3Q9UQQ2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH2B3Q9UQQ2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.33■■□□□ 1.01
SH2B3Q9UQQ2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.33■■□□□ 1
SH2B3Q9UQQ2 AC133637.1-201ENST00000624115 1537 ntBASIC21.33■■□□□ 1
SH2B3Q9UQQ2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.33■■□□□ 1
SH2B3Q9UQQ2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH2B3Q9UQQ2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.32■■□□□ 1
SH2B3Q9UQQ2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms